RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 TLR5O60602 858 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 CSF2P04141 144 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 WEE1P30291 646 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 DUOXA1Q1HG43 343 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 HLA-DQA1Q5Y7H0 255 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 IGFN1Q86VF2 1251 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 SERPINA9Q86WD7 417 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 RAVER1Q8IY67 606 aaKnown RBP17.68■□□□□ 0.42
SMC4-201ENST00000344722 OR13J1Q8NGT2 312 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 PIGKQ92643 395 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 HSH2DQ96JZ2 352 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 C14orf119Q9NWQ9 140 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 MOCS1Q9NZB8 636 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 FKBPLQ9UIM3 349 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 FKBP7Q9Y680 259 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 ISM1B1AKI9 464 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 DFNA5O60443 496 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 ZNF432O94892 652 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 GM2AP17900 193 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 ZNF132P52740 706 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 NFKB2Q00653 900 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 ADGRD2Q7Z7M1 963 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 TMEM192Q8IY95 271 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 ADAM2Q99965 735 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 FTHL17Q9BXU8 183 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 FBRSL1Q9HCM7 1045 aaKnown RBP17.68■□□□□ 0.42
SMC4-201ENST00000344722 PCDHAC2Q9Y5I4 1007 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 HMGB3O15347 200 aaKnown RBP17.68■□□□□ 0.42
SMC4-201ENST00000344722 NDUFV1P49821 464 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 PPP1R3AQ16821 1122 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 SOWAHAQ2M3V2 549 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 C9orf64Q5T6V5 341 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 TXNDC5Q8NBS9 432 aaKnown RBP17.68■□□□□ 0.42
SMC4-201ENST00000344722 OR10H4Q8NGA5 316 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 C15orf40Q8WUR7 153 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 CCDC107Q8WV48 283 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 ASPNQ9BXN1 380 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 ATG10Q9H0Y0 220 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 ZNF69Q9UC07 566 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 HCN2Q9UL51 889 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 DAPL1A0PJW8 107 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 XYLBO75191 536 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 NKX2-5P52952 324 aaPredicted RBP17.68■□□□□ 0.42
SMC4-201ENST00000344722 NAE1Q13564 534 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 LCN8Q6JVE9 175 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 FBXL19Q6PCT2 694 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 ZNF767PQ75MW2 155 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 LHPPQ9H008 270 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 CD93Q9NPY3 652 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 ARMC1Q9NVT9 282 aa17.68■□□□□ 0.42
SMC4-201ENST00000344722 ABHD14A-ACY1A0A1B0GW23 586 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 OR2AT4A6NND4 320 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 G6PDP11413 515 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 TPGS1Q6ZTW0 290 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 C17orf64Q86WR6 236 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 CHERPQ8IWX8 916 aaKnown RBP17.67■□□□□ 0.42
SMC4-201ENST00000344722 HAPLN3Q96S86 360 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 AIF1LQ9BQI0 150 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 MRPL9Q9BYD2 267 aaKnown RBP17.67■□□□□ 0.42
SMC4-201ENST00000344722 CALML5Q9NZT1 146 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 N6AMT1Q9Y5N5 214 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 SLIT2O94813 1529 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 TSPAN1O60635 241 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 CRYZL1O95825 349 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 SLC15A3Q8IY34 581 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 C2CD4AQ8NCU7 369 aaPredicted RBP17.67■□□□□ 0.42
SMC4-201ENST00000344722 ARL5AQ9Y689 179 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 SLC19A2O60779 497 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 MT-ND2P03891 347 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 MSL3P1P0C860 447 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 SSR2P43308 183 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 ZNF81P51508 661 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 MRPS6P82932 125 aaKnown RBP17.67■□□□□ 0.42
SMC4-201ENST00000344722 PCDH1Q08174 1060 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 SLC35G1Q2M3R5 365 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 PCDHGA11Q9Y5H2 935 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 ZNF24P17028 368 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 GSTM3P21266 225 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 OPRL1P41146 370 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 RBM34P42696 430 aaKnown RBP17.67■□□□□ 0.42
SMC4-201ENST00000344722 GPR1P46091 355 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 SDHAF4Q5VUM1 108 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 IFNLR1Q8IU57 520 aaPredicted RBP17.67■□□□□ 0.42
SMC4-201ENST00000344722 SLC43A3Q8NBI5 491 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 SNX27Q96L92 541 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 MAGEH1Q9H213 219 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 FAM83DQ9H4H8 585 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 SLC13A2Q13183 592 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 UBAP2Q5T6F2 1119 aaKnown RBP17.67■□□□□ 0.42
SMC4-201ENST00000344722 CFAP52Q8N1V2 620 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 ING5Q8WYH8 240 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 NCSTNQ92542 709 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 BCO2Q9BYV7 579 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 SLC29A3Q9BZD2 475 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 UCK2Q9BZX2 261 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 RHBGQ9H310 441 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 KCNK13Q9HB14 408 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 RC3H2Q9HBD1 1191 aaKnown RBP17.67■□□□□ 0.42
SMC4-201ENST00000344722 TMEM27Q9HBJ8 222 aa17.67■□□□□ 0.42
SMC4-201ENST00000344722 GOLGA2P5Q9HBQ8 144 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms