RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ITIH1P19827 911 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 HPCAL1P37235 193 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 TRAP1Q12931 704 aaKnown RBP7.15□□□□□ -1.26
ZNF540-202ENST00000343599 ART3Q13508 389 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 PDK1Q15118 436 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 CLEC16AQ2KHT3 1053 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 SLC25A52Q3SY17 297 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 FGD3Q5JSP0 725 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 AARS2Q5JTZ9 985 aaKnown RBP7.15□□□□□ -1.26
ZNF540-202ENST00000343599 RNF219Q5W0B1 726 aaPredicted RBP7.15□□□□□ -1.26
ZNF540-202ENST00000343599 C22orf39Q6P5X5 142 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 KIAA1324Q6UXG2 1013 aaKnown RBP7.15□□□□□ -1.26
ZNF540-202ENST00000343599 CARM1Q86X55 608 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 SETD7Q8WTS6 366 aaKnown RBP7.15□□□□□ -1.26
ZNF540-202ENST00000343599 HEXDCQ8WVB3 486 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 STON2Q8WXE9 905 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 FERD3LQ96RJ6 166 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 FEM1AQ9BSK4 669 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 ZNF717Q9BY31 904 aaPredicted RBP7.15□□□□□ -1.26
ZNF540-202ENST00000343599 VPS11Q9H270 941 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 SMYD3Q9H7B4 428 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 ARMCX1Q9P291 453 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 ASIC3Q9UHC3 531 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 KCND3Q9UK17 655 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 INTS6Q9UL03 887 aaKnown RBP7.15□□□□□ -1.26
ZNF540-202ENST00000343599 RIMKLBQ9ULI2 386 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 CDC14AQ9UNH5 594 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 EIF3LQ9Y262 564 aaKnown RBP7.15□□□□□ -1.26
ZNF540-202ENST00000343599 PCDHB11Q9Y5F2 797 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 CACNA1EQ15878 2313 aa7.15□□□□□ -1.26
ZNF540-202ENST00000343599 WDR91A4D1P6 747 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 EVPLLA8MZ36 301 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 HTRA2O43464 458 aaPredicted RBP7.15□□□□□ -1.27
ZNF540-202ENST00000343599 DYRK3O43781 588 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 ICAM2P13598 275 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 EVI2BP34910 448 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 PRSS12P56730 875 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 MAP3K7CLP57077 242 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 CAV1Q03135 178 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 CYP4F3Q08477 520 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 NFE2L1Q14494 772 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 ZNF235Q14590 738 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 ZNF846Q147U1 533 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 ALFQ53S48 1182 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 CLVS2Q5SYC1 327 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 CCDC137Q6PK04 289 aaKnown RBP7.15□□□□□ -1.27
ZNF540-202ENST00000343599 IRF2BP2Q7Z5L9 587 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 AFAP1L2Q8N4X5 818 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 BEND7Q8N7W2 519 aaPredicted RBP7.15□□□□□ -1.27
ZNF540-202ENST00000343599 DNAJB8Q8NHS0 232 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 MAPK15Q8TD08 544 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 COX14Q96I36 57 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 TPSD1Q9BZJ3 242 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 ZNF768Q9H5H4 540 aaKnown RBP7.15□□□□□ -1.27
ZNF540-202ENST00000343599 LRRC4Q9HBW1 653 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 DIABLOQ9NR28 239 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 OLAHQ9NV23 265 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 KCNK4Q9NYG8 393 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 EIF2B4Q9UI10 523 aaKnown RBP7.15□□□□□ -1.27
ZNF540-202ENST00000343599 PTBP2Q9UKA9 531 aaKnown RBP7.15□□□□□ -1.27
ZNF540-202ENST00000343599 NUP50Q9UKX7 468 aa7.15□□□□□ -1.27
ZNF540-202ENST00000343599 A0A1W2PPW3 197 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 THAP12O43422 761 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 CLPXO76031 633 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 PRLP01236 227 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 ANXA6P08133 673 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 KRT3P12035 628 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 CHRNB2P17787 502 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 XRCC1P18887 633 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-202ENST00000343599 TNNI1P19237 187 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 TKTL1P51854 596 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 TMED2Q15363 201 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 IGSF11Q5DX21 431 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 UBE2UQ5VVX9 321 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 UNC5AQ6ZN44 842 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 ZNF571Q7Z3V5 609 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-202ENST00000343599 SPRED1Q7Z699 444 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 PHACTR4Q8IZ21 702 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 SIX6OS1Q8N1H7 587 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 FAM109AQ8N4B1 249 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 SHC3Q92529 594 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 EEF2KMTQ96G04 330 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 ZNF668Q96K58 619 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-202ENST00000343599 COQ10AQ96MF6 247 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 SLC6A18Q96N87 628 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 TM9SF2Q99805 663 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 TIMM29Q9BSF4 260 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 SLC17A9Q9BYT1 436 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 IFT22Q9H7X7 185 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 MANSC1Q9H8J5 431 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 PDFQ9HBH1 243 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 CPNE5Q9HCH3 593 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 PNPLA3Q9NST1 481 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 RIMS3Q9UJD0 308 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 IGLON5A6NGN9 336 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 MTSS1O43312 755 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 TIPRLO75663 272 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 SRCP12931 536 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 GRK2P25098 689 aa7.14□□□□□ -1.27
ZNF540-202ENST00000343599 COILP38432 576 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms