RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 PCDHB11Q9Y5F2 797 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 TP53BP1Q12888 1972 aaPredicted RBP6.96□□□□□ -1.3
NUP43-201ENST00000340413 KMT2EQ8IZD2 1858 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 PIKFYVEQ9Y2I7 2098 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 PLK4O00444 970 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 GPR39O43194 453 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 SLC34A2O95436 690 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 PAK4O96013 591 aaPredicted RBP6.96□□□□□ -1.3
NUP43-201ENST00000340413 CSF2P04141 144 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 C1GALT1C1LP0DN25 315 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 PNLIPP16233 465 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 EPORP19235 508 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 ACSL1P33121 698 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 ERVPABLB-1P60509 514 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 UBE2IP63279 158 aaKnown RBP6.96□□□□□ -1.3
NUP43-201ENST00000340413 TXNL4AP83876 142 aaKnown RBP6.96□□□□□ -1.3
NUP43-201ENST00000340413 ILF3Q12906 894 aaKnown RBP eCLIP6.96□□□□□ -1.32e-7■■■□□ 17.5
NUP43-201ENST00000340413 CUL3Q13618 768 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 GAS6Q14393 721 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 ELOCQ15369 112 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 LSM12Q3MHD2 195 aaKnown RBP6.96□□□□□ -1.3
NUP43-201ENST00000340413 CWF19L1Q69YN2 538 aaKnown RBP6.96□□□□□ -1.3
NUP43-201ENST00000340413 NXPE4Q6UWF7 544 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 SLCO4C1Q6ZQN7 724 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 GOLM1Q8NBJ4 401 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 OR4F6Q8NGB9 312 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 CEP76Q8TAP6 659 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 TRPC4APQ8TEL6 797 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 HMGB4Q8WW32 186 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 CCDC97Q96F63 343 aaPredicted RBP6.96□□□□□ -1.3
NUP43-201ENST00000340413 SLC25A23Q9BV35 468 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.96□□□□□ -1.3
NUP43-201ENST00000340413 NOL11Q9H8H0 719 aaKnown RBP6.96□□□□□ -1.3
NUP43-201ENST00000340413 NDUFAF1Q9Y375 327 aa6.96□□□□□ -1.3
NUP43-201ENST00000340413 CEP192Q8TEP8 1941 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 COL5A1P20908 1838 aaPredicted RBP6.95□□□□□ -1.3
NUP43-201ENST00000340413 C15orf38-AP3S2A0A0A6YYH1 394 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 NEMP2A6NFY4 417 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 UBDO15205 165 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 F3P13726 295 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 SERPINB3P29508 390 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 AHRP35869 848 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 ASMTP46597 345 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 EMP3P54852 163 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 NXPH1P58417 271 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 KLF10Q13118 480 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 RIPK1Q13546 671 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 RPE65Q16518 533 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 ZNF423Q2M1K9 1284 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 TMEM35AQ53FP2 167 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 C16orf89Q6UX73 402 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 ATG14Q6ZNE5 492 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 ARPINQ7Z6K5 226 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 GAB3Q8WWW8 586 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 SLC5A11Q8WWX8 675 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 CAMK1GQ96NX5 476 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 QRFPRQ96P65 431 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 INTS7Q9NVH2 962 aaKnown RBP6.95□□□□□ -1.3
NUP43-201ENST00000340413 SPASTQ9UBP0 616 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 EIF3LQ9Y262 564 aaKnown RBP6.95□□□□□ -1.3
NUP43-201ENST00000340413 PRRC2BQ5JSZ5 2229 aaKnown RBP6.95□□□□□ -1.3
NUP43-201ENST00000340413 EML5Q05BV3 1969 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 A0A0U1RQS6 177 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 TRBC2A0A5B9 178 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 E7ENX8 843 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 ZW10O43264 779 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 SCTRP47872 440 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 HSPA7P48741 367 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 TAP2Q03519 686 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 SQSTM1Q13501 440 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 ALG11Q2TAA5 492 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 PTCHD3Q3KNS1 767 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 SLC9B1Q4ZJI4 515 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 PRAMEF14Q5SWL7 426 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 PRAMEF13Q5VWM6 474 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 IL27RAQ6UWB1 636 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 FAM83HQ6ZRV2 1179 aaPredicted RBP6.95□□□□□ -1.3
NUP43-201ENST00000340413 Q7L0L9 218 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 DET1Q7L5Y6 550 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 SLC9B2Q86UD5 537 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 MTDHQ86UE4 582 aaKnown RBP6.95□□□□□ -1.3
NUP43-201ENST00000340413 ZNF480Q8WV37 535 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 OR1E3Q8WZA6 343 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 BIRC7Q96CA5 298 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 ERP27Q96DN0 273 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 RILPQ96NA2 401 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 CD180Q99467 661 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 ROGDIQ9GZN7 287 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 ABCG4Q9H172 646 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 CYP4F12Q9HCS2 524 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 BCAP29Q9UHQ4 241 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 KLF15Q9UIH9 416 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 MBD1Q9UIS9 605 aaPredicted RBP6.95□□□□□ -1.3
NUP43-201ENST00000340413 ZNF225Q9UK10 706 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 LAMA3Q16787 3333 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 FAM234BA2RU67 622 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 CCNT2O60583 730 aaKnown RBP6.95□□□□□ -1.3
NUP43-201ENST00000340413 ULK1O75385 1050 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 UBOX5O94941 541 aa6.95□□□□□ -1.3
NUP43-201ENST00000340413 CD38P28907 300 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms