RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 OXTRP30559 389 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 MNDAP41218 407 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 STAT5AP42229 794 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 EIF6P56537 245 aaKnown RBP4.07□□□□□ -1.76
NEDD4-201ENST00000338963 EXOSC2Q13868 293 aaKnown RBP4.07□□□□□ -1.76
NEDD4-201ENST00000338963 C21orf62-AS1Q17RA5 79 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 ZC3H14Q6PJT7 736 aaKnown RBP4.07□□□□□ -1.76
NEDD4-201ENST00000338963 LRRC8DQ7L1W4 858 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 FAM160B2Q86V87 743 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 PSTKQ8IV42 348 aaKnown RBP4.07□□□□□ -1.76
NEDD4-201ENST00000338963 PHTF2Q8N3S3 785 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 LNX2Q8N448 690 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 DNAAF1Q8NEP3 725 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 OR4A15Q8NGL6 344 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 COL21A1Q96P44 957 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 YIPF4Q9BSR8 244 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 SAP130Q9H0E3 1048 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 NT5MQ9NPB1 228 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 COQ3Q9NZJ6 369 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 BOLA1Q9Y3E2 137 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 PRR23D1E9PI22 279 aaPredicted RBP4.07□□□□□ -1.76
NEDD4-201ENST00000338963 PRR23D2P0DMB1 279 aaPredicted RBP4.07□□□□□ -1.76
NEDD4-201ENST00000338963 RALAP11233 206 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 MYCLP12524 364 aaPredicted RBP4.07□□□□□ -1.76
NEDD4-201ENST00000338963 FOLR2P14207 255 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 KEAP1Q14145 624 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 POU4F3Q15319 338 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 DPYSL2Q16555 572 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 KCTD19Q17RG1 926 aaPredicted RBP4.07□□□□□ -1.76
NEDD4-201ENST00000338963 TMEM119Q4V9L6 283 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 ZNF470Q6ECI4 717 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 KIAA1324Q6UXG2 1013 aaKnown RBP4.07□□□□□ -1.76
NEDD4-201ENST00000338963 FAM196AQ6ZSG2 479 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 TMPRSS11FQ6ZWK6 438 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 BVESQ8NE79 360 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 OR2T11Q8NH01 316 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 TM9SF4Q92544 642 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 HDAC10Q969S8 669 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 MFSD14AQ96MC6 490 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 COQ10AQ96MF6 247 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 NOL4LQ96MY1 436 aaPredicted RBP4.07□□□□□ -1.76
NEDD4-201ENST00000338963 TINF2Q9BSI4 451 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 XPR1Q9UBH6 696 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 SPASTQ9UBP0 616 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 MIOXQ9UGB7 285 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 CA14Q9ULX7 337 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 CMAHPQ9Y471 501 aa4.07□□□□□ -1.76
NEDD4-201ENST00000338963 A8MXK9 166 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SCN2BO60939 215 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 GGCTO75223 188 aaKnown RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 RAP2AP10114 183 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 CBLP22681 906 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 LCN1P31025 176 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 LIMK2P53671 638 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 IL5RAQ01344 420 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 MS4A2Q01362 244 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ZNF284Q2VY69 593 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 FBXO31Q5XUX0 539 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 FAM183BPQ6ZVS7 135 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 RAB44Q7Z6P3 723 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 MUS81Q96NY9 551 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 POLLQ9UGP5 575 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SPATA31A6Q5VVP1 1343 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 hCG_1642624A0A1W2PR95 340 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 M0QZ92 97 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SLC1A7O00341 560 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 NSA2O95478 260 aaKnown RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 TIMP2P16035 220 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SPNP16150 400 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 GTF2E2P29084 291 aaKnown RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SERPINF1P36955 418 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 FMO5P49326 533 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ZNF155Q12901 538 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 PCBP1Q15365 356 aaKnown RBP eCLIP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 GPR68Q15743 365 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 GUCA2BQ16661 112 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SMTNL2Q2TAL5 461 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 OR2B11Q5JQS5 317 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 HECTD3Q5T447 861 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 CHMP1BQ7LBR1 199 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 MCOLN2Q8IZK6 566 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 OR13C3Q8NGS6 347 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 CERKQ8TCT0 537 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SCMH1Q96GD3 660 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 RNF157Q96PX1 679 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 KCNJ15Q99712 375 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SYT11Q9BT88 431 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 METTL8Q9H825 291 aaKnown RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 DDX31Q9H8H2 851 aaKnown RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 CDHR5Q9HBB8 845 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ZBTB26Q9HCK0 441 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SIX2Q9NPC8 291 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 HSPBP1Q9NZL4 362 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SLC9A8Q9Y2E8 581 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 PADI2Q9Y2J8 665 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 KIAA0556O60303 1618 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 FAM149AA5PLN7 773 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 A8MUA0 341 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SLC19A2O60779 497 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 PRAMEF2O60811 474 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms