RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 TMEM26Q6ZUK4 368 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 ZNF761Q86XN6 746 aaPredicted RBP20.83■□□□□ 0.93
TPM1-204ENST00000334895 C2orf73Q8N5S3 287 aaPredicted RBP20.83■□□□□ 0.93
TPM1-204ENST00000334895 ARL10Q8N8L6 244 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 OR4C6Q8NH72 309 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 OR4K3Q96R72 315 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 SGPP1Q9BX95 441 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 DRC3Q9H069 523 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 SLCO1B3Q9NPD5 702 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 LNPEPQ9UIQ6 1025 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 SLC22A14Q9Y267 594 aa20.83■□□□□ 0.93
TPM1-204ENST00000334895 GOLGA4Q13439 2230 aaKnown RBP20.83■□□□□ 0.92
TPM1-204ENST00000334895 A0A1W2PPV9 198 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 TCP11X1B4DZS4 312 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 K7EPI3 171 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 NPHS1O60500 1241 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 WDR47O94967 919 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 CHRNGP07510 517 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 HSD17B2P37059 387 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 GNGT1P63211 74 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 RCN2Q14257 317 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 CFAP157Q5JU67 520 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 METTL2BQ6P1Q9 378 aaKnown RBP20.82■□□□□ 0.92
TPM1-204ENST00000334895 SUSD1Q6UWL2 747 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 LRRC70Q7Z2Q7 622 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 GOLGA7Q7Z5G4 137 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 ALYREFQ86V81 257 aaKnown RBP20.82■□□□□ 0.92
TPM1-204ENST00000334895 OR2L8Q8NGY9 312 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 HMGCLL1Q8TB92 370 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 LCN9Q8WX39 176 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 MED8Q96G25 268 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 SORT1Q99523 831 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 SLC32A1Q9H598 525 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 OPTCQ9UBM4 332 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 ZNF292O60281 2723 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 A0A1B0GTL3 188 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 TMEM114B3SHH9 223 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 UBFD1O14562 309 aaKnown RBP20.82■□□□□ 0.92
TPM1-204ENST00000334895 LRP3O75074 770 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 MYF5P13349 255 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 LSP1P33241 339 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 SLC1A6P48664 564 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 ABCE1P61221 599 aaKnown RBP20.82■□□□□ 0.92
TPM1-204ENST00000334895 OCRLQ01968 901 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 CLCQ05315 142 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 GTF2H2Q13888 395 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 ARL13AQ5H913 290 aaPredicted RBP20.82■□□□□ 0.92
TPM1-204ENST00000334895 ATG16L1Q676U5 607 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 GTF2H2CQ6P1K8 395 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 RBM12BQ8IXT5 1001 aaKnown RBP20.82■□□□□ 0.92
TPM1-204ENST00000334895 TEX9Q8N6V9 391 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 OR4E2Q8NGC2 313 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 CNDP1Q96KN2 507 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 RAB11FIP5Q9BXF6 653 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 TWSG1Q9GZX9 223 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 SEMA4BQ9NPR2 832 aaPredicted RBP20.82■□□□□ 0.92
TPM1-204ENST00000334895 RXFP3Q9NSD7 469 aa20.82■□□□□ 0.92
TPM1-204ENST00000334895 LY6G6EA0A0G2JKS1 128 aa20.81■□□□□ 0.92
TPM1-204ENST00000334895 ZNF883P0CG24 379 aa20.81■□□□□ 0.92
TPM1-204ENST00000334895 PEBP1P30086 187 aaKnown RBP20.81■□□□□ 0.92
TPM1-204ENST00000334895 CSRP2Q16527 193 aa20.81■□□□□ 0.92
TPM1-204ENST00000334895 FAM219BQ5XKK7 198 aa20.81■□□□□ 0.92
TPM1-204ENST00000334895 ZCCHC8Q6NZY4 707 aaKnown RBP20.81■□□□□ 0.92
TPM1-204ENST00000334895 THOC6Q86W42 341 aaKnown RBP20.81■□□□□ 0.92
TPM1-204ENST00000334895 AMIGO1Q86WK6 493 aa20.81■□□□□ 0.92
TPM1-204ENST00000334895 AVL9Q8NBF6 648 aa20.81■□□□□ 0.92
TPM1-204ENST00000334895 TRPC4APQ8TEL6 797 aa20.81■□□□□ 0.92
TPM1-204ENST00000334895 PPP4R1Q8TF05 950 aa20.81■□□□□ 0.92
TPM1-204ENST00000334895 ZNF317Q96PQ6 595 aaPredicted RBP20.81■□□□□ 0.92
TPM1-204ENST00000334895 DUSP23Q9BVJ7 150 aa20.81■□□□□ 0.92
TPM1-204ENST00000334895 TBC1D10AQ9BXI6 508 aa20.81■□□□□ 0.92
TPM1-204ENST00000334895 CCDC177Q9NQR7 707 aaPredicted RBP20.81■□□□□ 0.92
TPM1-204ENST00000334895 DNAJC11Q9NVH1 559 aa20.81■□□□□ 0.92
TPM1-204ENST00000334895 DNAAF2Q9NVR5 837 aaKnown RBP20.81■□□□□ 0.92
TPM1-204ENST00000334895 SH2B3Q9UQQ2 575 aa20.81■□□□□ 0.92
TPM1-204ENST00000334895 U3KQA8 63 aa20.81■□□□□ 0.92
TPM1-204ENST00000334895 BTN3A3O00478 584 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 OR7A17O14581 309 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 SIGLEC6O43699 453 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 SHMT2P34897 504 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 ATXN3P54252 364 aaPredicted RBP20.8■□□□□ 0.92
TPM1-204ENST00000334895 PLCL1Q15111 1095 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 CAPN13Q6MZZ7 669 aaPredicted RBP20.8■□□□□ 0.92
TPM1-204ENST00000334895 PRR23CQ6ZRP0 262 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 ADGRF3Q8IZF5 1079 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 RAB42Q8N4Z0 105 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 OR52B6Q8NGF0 335 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 SMPDL3AQ92484 453 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 SHCBP1LQ9BZQ2 653 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 SRMSQ9H3Y6 488 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 TNFRSF12AQ9NP84 129 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 ABCF3Q9NUQ8 709 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 THAP1Q9NVV9 213 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 SPHK1Q9NYA1 384 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 OR6C2Q9NZP2 312 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 ZNF225Q9UK10 706 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 RNF215Q9Y6U7 377 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 PIEZO1Q92508 2521 aa20.8■□□□□ 0.92
TPM1-204ENST00000334895 CDX4O14627 284 aaPredicted RBP20.79■□□□□ 0.92
TPM1-204ENST00000334895 PRICKLE3O43900 615 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms