RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 KLHDC8AQ8IYD2 350 aa16.93■□□□□ 0.3
CHGA-202ENST00000334654 SYTL1Q8IYJ3 562 aa16.93■□□□□ 0.3
CHGA-202ENST00000334654 GOLGA6L1Q8N7Z2 621 aa16.93■□□□□ 0.3
CHGA-202ENST00000334654 ARMC2Q8NEN0 867 aa16.93■□□□□ 0.3
CHGA-202ENST00000334654 ATL1Q8WXF7 558 aa16.93■□□□□ 0.3
CHGA-202ENST00000334654 SGPP1Q9BX95 441 aa16.93■□□□□ 0.3
CHGA-202ENST00000334654 KCNK9Q9NPC2 374 aa16.93■□□□□ 0.3
CHGA-202ENST00000334654 INTS7Q9NVH2 962 aaKnown RBP16.93■□□□□ 0.3
CHGA-202ENST00000334654 TMEM120BA0PK00 339 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 H3BQF6 201 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 NTN3O00634 580 aaPredicted RBP16.92■□□□□ 0.3
CHGA-202ENST00000334654 DHRS4L1P0CG22 281 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 POLR2CP19387 275 aaPredicted RBP16.92■□□□□ 0.3
CHGA-202ENST00000334654 CSF2RBP32927 897 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 GDF5P43026 501 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 CAPZBP47756 277 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 ALDH18A1P54886 795 aaKnown RBP16.92■□□□□ 0.3
CHGA-202ENST00000334654 PPP1CAP62136 330 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 GPLD1P80108 840 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 NFKB2Q00653 900 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 PCLAFQ15004 111 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 PTCHD3Q3KNS1 767 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 ZYG11AQ6WRX3 759 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 TMPRSS9Q7Z410 1059 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 FBXO39Q8N4B4 442 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 OR2A1Q8NGT9 310 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 UBTD2Q8WUN7 234 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 SMPDL3AQ92484 453 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 PYCR2Q96C36 320 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 PHF21BQ96EK2 531 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 RAB33BQ9H082 229 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 IQCGQ9H095 443 aaKnown RBP16.92■□□□□ 0.3
CHGA-202ENST00000334654 EVA1BQ9NVM1 165 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 HRASLS2Q9NWW9 162 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 FAM53CQ9NYF3 392 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 COPG2Q9UBF2 871 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 EPHA6Q9UF33 1036 aa16.92■□□□□ 0.3
CHGA-202ENST00000334654 TM9SF1O15321 606 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 GFAPP14136 432 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 CPA3P15088 417 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 AMD1P17707 334 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 ATP5F1P24539 256 aaPredicted RBP16.91■□□□□ 0.3
CHGA-202ENST00000334654 PSMB5P28074 263 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 HSPA7P48741 367 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 WDR4P57081 412 aaKnown RBP16.91■□□□□ 0.3
CHGA-202ENST00000334654 TBPL1P62380 186 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 YBX1P67809 324 aaKnown RBP16.91■□□□□ 0.3
CHGA-202ENST00000334654 AMZ1Q400G9 498 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 USP53Q70EK8 1073 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 TAX1BP1Q86VP1 789 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 TCAIMQ8N3R3 496 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 PTGR2Q8N8N7 351 aaPredicted RBP16.91■□□□□ 0.3
CHGA-202ENST00000334654 RDH11Q8TC12 318 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 OR2A14Q96R47 310 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 OR4K3Q96R72 315 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 ABCG4Q9H172 646 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 LRRN3Q9H3W5 708 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 EPB41L1Q9H4G0 881 aa16.91■□□□□ 0.3
CHGA-202ENST00000334654 PIPSLA2A3N6 862 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 PABPN1LA6NDY0 278 aaKnown RBP16.9■□□□□ 0.3
CHGA-202ENST00000334654 STX16-NPEPL1H3BU86 382 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 STX16O14662 325 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 SMIM24O75264 130 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 IPO13O94829 963 aaKnown RBP16.9■□□□□ 0.3
CHGA-202ENST00000334654 DKK1O94907 266 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 ZWINTO95229 277 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 SIX3O95343 332 aaPredicted RBP16.9■□□□□ 0.3
CHGA-202ENST00000334654 RPLP0P05388 317 aaKnown RBP16.9■□□□□ 0.3
CHGA-202ENST00000334654 HOXB3P14651 431 aaPredicted RBP16.9■□□□□ 0.3
CHGA-202ENST00000334654 NPPBP16860 134 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 TAC1P20366 129 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 KIR2DS3Q14952 304 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 PCBP2Q15366 365 aaKnown RBP eCLIP16.9■□□□□ 0.3
CHGA-202ENST00000334654 ZNF574Q6ZN55 896 aaPredicted RBP16.9■□□□□ 0.3
CHGA-202ENST00000334654 SLCO6A1Q86UG4 719 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 OOSP2Q86WS3 158 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 RAB42Q8N4Z0 105 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 OR10G6Q8NH81 332 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 NCSTNQ92542 709 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 MOCOSQ96EN8 888 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 PPM1MQ96MI6 270 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 NUDT22Q9BRQ3 303 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 CD244Q9BZW8 370 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 MED4Q9NPJ6 270 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 OXSMQ9NWU1 459 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 ACTR10Q9NZ32 417 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 WWOXQ9NZC7 414 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 TMEM9Q9P0T7 183 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 ATXN7L1Q9ULK2 861 aaPredicted RBP16.9■□□□□ 0.3
CHGA-202ENST00000334654 TMCO1Q9UM00 188 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 ENTPD2Q9Y5L3 495 aa16.9■□□□□ 0.3
CHGA-202ENST00000334654 ZNF839A8K0R7 811 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 GIPC1O14908 333 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 STK16O75716 305 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 C9P02748 559 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 S100BP04271 92 aaPredicted RBP16.89■□□□□ 0.29
CHGA-202ENST00000334654 MYL2P10916 166 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 UGT2B7P16662 529 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 KCNA4P22459 653 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 OAS2P29728 719 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms