RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 HHIPQ96QV1 700 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 ADGRE2Q9UHX3 823 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 SCML1Q9UN30 329 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 FADS2O95864 444 aaKnown RBP11.53□□□□□ -0.56
HDAC6-201ENST00000334136 OGNP20774 298 aaKnown RBP11.53□□□□□ -0.56
HDAC6-201ENST00000334136 RPL6Q02878 288 aaKnown RBP11.53□□□□□ -0.56
HDAC6-201ENST00000334136 C6orf183Q5T699 404 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 HECTD2Q5U5R9 776 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 EPGNQ6UW88 154 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 ENPP7Q6UWV6 458 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 THAP5Q7Z6K1 395 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 OR2T12Q8NG77 320 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 PHF21AQ96BD5 680 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 ASB9Q96DX5 294 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 LRRC3Q9BY71 257 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 TRIM8Q9BZR9 551 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 SOX17Q9H6I2 414 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-201ENST00000334136 FBRSL1Q9HCM7 1045 aaKnown RBP11.53□□□□□ -0.56
HDAC6-201ENST00000334136 CLDN25C9JDP6 229 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 E7ESA3 106 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 DLX3O60479 287 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 ZNF217O75362 1048 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 ANXA6P08133 673 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 ADRB3P13945 408 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 ZNF182P17025 639 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-201ENST00000334136 SUOXP51687 545 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 PRKCQQ04759 706 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 CNTN1Q12860 1018 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 HIST2H2ACQ16777 129 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-201ENST00000334136 HIST2H2AA3Q6FI13 130 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 TAF8Q7Z7C8 310 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 TRIM69Q86WT6 500 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 HIPK1Q86Z02 1210 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 MYEOVQ96EZ4 313 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 SCRN2Q96FV2 425 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 FAM83CQ9BQN1 747 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 REEP1Q9H902 201 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 TBC1D17Q9HA65 648 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 CLEC1BQ9P126 229 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 DYRK1BQ9Y463 629 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 IDH3BO43837 385 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 NOBOXO60393 691 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 RNGTTO60942 597 aaKnown RBP11.52□□□□□ -0.56
HDAC6-201ENST00000334136 MTX2O75431 263 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 SIX3O95343 332 aaPredicted RBP11.52□□□□□ -0.56
HDAC6-201ENST00000334136 KRT6AP02538 564 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 KRT6BP04259 564 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 THRBP10828 461 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 KRT6CP48668 564 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 BLKP51451 505 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 HTR4Q13639 388 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 CEACAM7Q14002 265 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 WDR45BQ5MNZ6 344 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 TYW3Q6IPR3 259 aaKnown RBP11.52□□□□□ -0.56
HDAC6-201ENST00000334136 RANBP10Q6VN20 620 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 CFAP206Q8IYR0 622 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 MED8Q96G25 268 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 AHCYL2Q96HN2 611 aaKnown RBP11.52□□□□□ -0.56
HDAC6-201ENST00000334136 IMP3Q9NV31 184 aaKnown RBP11.52□□□□□ -0.56
HDAC6-201ENST00000334136 THAP10Q9P2Z0 257 aaPredicted RBP11.52□□□□□ -0.56
HDAC6-201ENST00000334136 GULP1Q9UBP9 304 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 GIMAP2Q9UG22 337 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 ITGB1BP2Q9UKP3 347 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 SLC27A6Q9Y2P4 619 aa11.52□□□□□ -0.56
HDAC6-201ENST00000334136 TRBV23OR9-2A0A075B6M9 112 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 EFCAB10A6NFE3 127 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 H3BM21 787 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 PIP5K1BO14986 540 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 VPS4BO75351 444 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 LRATO95237 230 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 EGFP01133 1207 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 ESR1P03372 595 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 CHRM1P11229 460 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-201ENST00000334136 GCAP28676 217 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 OXTRP30559 389 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 INAQ16352 499 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 FBXL20Q96IG2 436 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 PLEKHA8Q96JA3 519 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 ZNF514Q96K75 400 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-201ENST00000334136 GPR21Q99679 349 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 TRMOQ9BU70 441 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 PLA2G2FQ9BZM2 168 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 TPK1Q9H3S4 243 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 KCNK13Q9HB14 408 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 PNMA8CA0A1B0GUJ8 204 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 MGAT4DA6NG13 374 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 IGLON5A6NGN9 336 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 PRRT4C9JH25 899 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 ZW10O43264 779 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 TNFRSF21O75509 655 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 COL6A2P12110 1019 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 AMD1P17707 334 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 ETV3P41162 512 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 RHDQ02161 417 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 EPS8Q12929 822 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 CPSF6Q16630 551 aaKnown RBP eCLIP11.52□□□□□ -0.57
HDAC6-201ENST00000334136 GPRIN3Q6ZVF9 776 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 UBALD2Q8IYN6 164 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 OR2A12Q8NGT7 310 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 LINGO1Q96FE5 620 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms