RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 NKX3-2P78367 333 aa23.75■■□□□ 1.39
SOX1-201ENST00000330949 EFR3AQ14156 821 aa23.75■■□□□ 1.39
SOX1-201ENST00000330949 TIMM50Q3ZCQ8 353 aa23.75■■□□□ 1.39
SOX1-201ENST00000330949 C9orf57Q5W0N0 161 aa23.75■■□□□ 1.39
SOX1-201ENST00000330949 FAM205BPQ63HN1 556 aa23.75■■□□□ 1.39
SOX1-201ENST00000330949 GCNT7Q6ZNI0 430 aa23.75■■□□□ 1.39
SOX1-201ENST00000330949 DEDD2Q8WXF8 326 aa23.75■■□□□ 1.39
SOX1-201ENST00000330949 AIFM2Q9BRQ8 373 aa23.75■■□□□ 1.39
SOX1-201ENST00000330949 DERL2Q9GZP9 239 aa23.75■■□□□ 1.39
SOX1-201ENST00000330949 ZNF556Q9HAH1 456 aa23.75■■□□□ 1.39
SOX1-201ENST00000330949 PLCXD1Q9NUJ7 323 aa23.75■■□□□ 1.39
SOX1-201ENST00000330949 PDP1Q9P0J1 537 aaPredicted RBP23.75■■□□□ 1.39
SOX1-201ENST00000330949 OR5K3A6NET4 321 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 PDHXO00330 501 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 CCL22O00626 93 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 KIAA0513O60268 411 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 CDK1P06493 297 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 IGFBP6P24592 240 aaPredicted RBP23.74■■□□□ 1.39
SOX1-201ENST00000330949 ETV3P41162 512 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 CREB3L2Q70SY1 520 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 ARHGAP12Q8IWW6 846 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 OR10T2Q8NGX3 314 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 ULBP1Q9BZM6 244 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 MMP28Q9H239 520 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 MAT2BQ9NZL9 334 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 OR51F1A6NGY5 319 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 MEN1O00255 615 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 PLK4O00444 970 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 NAGAP17050 411 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 SCN1BQ07699 218 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 NPRL3Q12980 569 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 TNK1Q13470 666 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 KIAA0040Q15053 153 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 TRIM60Q495X7 471 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 TOR1AIP1Q5JTV8 583 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 TIGD3Q6B0B8 471 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 TIGD7Q6NT04 549 aaPredicted RBP23.74■■□□□ 1.39
SOX1-201ENST00000330949 FBXL6Q8N531 539 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 ATG16L2Q8NAA4 619 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 NUDT8Q8WV74 236 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 B3GNT4Q9C0J1 378 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 POLR3HQ9Y535 204 aaPredicted RBP23.74■■□□□ 1.39
SOX1-201ENST00000330949 CA12O43570 354 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 OR4F21O95013 312 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 ALPPP05187 535 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 UQCRC1P31930 480 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 CXCR3P49682 368 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 ATG9BQ674R7 924 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 KDELC1Q6UW63 502 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 NIPAL2Q9H841 368 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 SMURF1Q9HCE7 757 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 OLA1Q9NTK5 396 aaKnown RBP23.74■■□□□ 1.39
SOX1-201ENST00000330949 KLHL21Q9UJP4 597 aa23.74■■□□□ 1.39
SOX1-201ENST00000330949 MROH6A6NGR9 719 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 MYL9P24844 172 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 GZMKP49863 264 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 DAOAP59103 153 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 IRF3Q14653 427 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 NR6A1Q15406 480 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 RUNDC3AQ59EK9 446 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 MLIPQ5VWP3 458 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 VWA5B2Q8N398 1253 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 COL21A1Q96P44 957 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 UCK2Q9BZX2 261 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 C1orf109Q9NX04 203 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 SLC25A37Q9NYZ2 338 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 GALPQ9UBC7 116 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 IPPQ9Y573 584 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 CYP7B1O75881 506 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 GLP2RO95838 553 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 ZBTB6Q15916 424 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 CLEC20AQ6ZU45 233 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 FRMD6Q96NE9 622 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 RAD9AQ99638 391 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 ATP13A1Q9HD20 1204 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 MUTYHQ9UIF7 546 aa23.73■■□□□ 1.39
SOX1-201ENST00000330949 SAMD4AQ9UPU9 718 aaKnown RBP23.73■■□□□ 1.39
SOX1-201ENST00000330949 A0A0G2JLL6 359 aaPredicted RBP23.72■■□□□ 1.39
SOX1-201ENST00000330949 CLCA1A8K7I4 914 aa23.72■■□□□ 1.39
SOX1-201ENST00000330949 LEUTXA8MZ59 168 aa23.72■■□□□ 1.39
SOX1-201ENST00000330949 RGS5O15539 181 aa23.72■■□□□ 1.39
SOX1-201ENST00000330949 SLC25A27O95847 323 aa23.72■■□□□ 1.39
SOX1-201ENST00000330949 AGTR2P50052 363 aa23.72■■□□□ 1.39
SOX1-201ENST00000330949 TSNQ15631 228 aaKnown RBP23.72■■□□□ 1.39
SOX1-201ENST00000330949 MRNIPQ6NTE8 343 aa23.72■■□□□ 1.39
SOX1-201ENST00000330949 PRRT2Q7Z6L0 340 aaPredicted RBP23.72■■□□□ 1.39
SOX1-201ENST00000330949 FAM120BQ96EK7 910 aaKnown RBP23.72■■□□□ 1.39
SOX1-201ENST00000330949 SPASTQ9UBP0 616 aa23.72■■□□□ 1.39
SOX1-201ENST00000330949 ABCG2Q9UNQ0 655 aa23.72■■□□□ 1.39
SOX1-201ENST00000330949 ZSWIM8A7E2V4 1837 aa23.72■■□□□ 1.39
SOX1-201ENST00000330949 ADORA3P0DMS8 318 aa23.72■■□□□ 1.39
SOX1-201ENST00000330949 SDE2Q6IQ49 451 aa23.72■■□□□ 1.39
SOX1-201ENST00000330949 MSRB3Q8IXL7 192 aa23.72■■□□□ 1.39
SOX1-201ENST00000330949 RDH10Q8IZV5 341 aa23.72■■□□□ 1.39
SOX1-201ENST00000330949 MCCC1Q96RQ3 725 aaPredicted RBP23.72■■□□□ 1.39
SOX1-201ENST00000330949 RNF39Q9H2S5 420 aa23.72■■□□□ 1.39
SOX1-201ENST00000330949 IL1RAPQ9NPH3 570 aa23.72■■□□□ 1.39
SOX1-201ENST00000330949 DNAJC25-GNG10A0A024R161 153 aa23.71■■□□□ 1.39
SOX1-201ENST00000330949 SLC12A8A0AV02 714 aa23.71■■□□□ 1.39
SOX1-201ENST00000330949 NCF1BA6NI72 391 aaPredicted RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms