RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 FRG2Q64ET8 278 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 SLC2A7Q6PXP3 512 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 DHDDSQ86SQ9 333 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 KBTBD2Q8IY47 623 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 LMNTD1Q8N9Z9 388 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 TP53I13Q8NBR0 393 aaPredicted RBP16.46■□□□□ 0.23
DDX41-201ENST00000330503 SPDYE1Q8NFV5 336 aaPredicted RBP16.46■□□□□ 0.23
DDX41-201ENST00000330503 TMEM125Q96AQ2 219 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 ANKRD27Q96NW4 1050 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 FRG2BQ96QU4 278 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 C1QTNF2Q9BXJ5 285 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 TM7SF3Q9NS93 570 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 BCAP29Q9UHQ4 241 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 NPIPB8E9PQR5 432 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 DNAJA2O60884 412 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 VARSP26640 1264 aaKnown RBP16.45■□□□□ 0.22
DDX41-201ENST00000330503 TRIM23P36406 574 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 CCR3P51677 355 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 MRPS22P82650 360 aaKnown RBP16.45■□□□□ 0.22
DDX41-201ENST00000330503 IRF4Q15306 451 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 IER5LQ5T953 404 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 COL13A1Q5TAT6 717 aaPredicted RBP16.45■□□□□ 0.22
DDX41-201ENST00000330503 DPP10Q8N608 796 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 OR9A1PQ8NGU1 263 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 MAGEB10Q96LZ2 347 aaPredicted RBP16.45■□□□□ 0.22
DDX41-201ENST00000330503 TRIM8Q9BZR9 551 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 OR1A2Q9Y585 309 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 F5P12259 2224 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 DYTNA2CJ06 578 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 KLF8O95600 359 aaPredicted RBP16.45■□□□□ 0.22
DDX41-201ENST00000330503 TAF11Q15544 211 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 SDE2Q6IQ49 451 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 DLEU7Q6UYE1 221 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 AMZ2Q86W34 360 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 LRRC56Q8IYG6 542 aaPredicted RBP16.45■□□□□ 0.22
DDX41-201ENST00000330503 KIAA2013Q8IYS2 634 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 WDR20Q8TBZ3 569 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 GANCQ8TET4 914 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 DNAJC9Q8WXX5 260 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 CMTM7Q96FZ5 175 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 OSBPL6Q9BZF3 934 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 PSMD13Q9UNM6 376 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 DLGAP4Q9Y2H0 992 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 BRWD1Q9NSI6 2320 aa16.45■□□□□ 0.22
DDX41-201ENST00000330503 IFRD1O00458 451 aaPredicted RBP16.44■□□□□ 0.22
DDX41-201ENST00000330503 PLRG1O43660 514 aaKnown RBP16.44■□□□□ 0.22
DDX41-201ENST00000330503 FUCA1P04066 466 aa16.44■□□□□ 0.22
DDX41-201ENST00000330503 TEAD1P28347 426 aa16.44■□□□□ 0.22
DDX41-201ENST00000330503 CASP2P42575 452 aa16.44■□□□□ 0.22
DDX41-201ENST00000330503 CACHD1Q5VU97 1274 aa16.44■□□□□ 0.22
DDX41-201ENST00000330503 LRRTM4Q86VH4 590 aa16.44■□□□□ 0.22
DDX41-201ENST00000330503 KRTCAP2Q8N6L1 136 aa16.44■□□□□ 0.22
DDX41-201ENST00000330503 OR14C36Q8NHC7 312 aa16.44■□□□□ 0.22
DDX41-201ENST00000330503 DNAJB14Q8TBM8 379 aa16.44■□□□□ 0.22
DDX41-201ENST00000330503 APIPQ96GX9 242 aa16.44■□□□□ 0.22
DDX41-201ENST00000330503 TTYH1Q9H313 450 aaPredicted RBP16.44■□□□□ 0.22
DDX41-201ENST00000330503 COL4A2P08572 1712 aa16.44■□□□□ 0.22
DDX41-201ENST00000330503 A0A1W2PQU0 124 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 GRXCR2A6NFK2 248 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 CLGNO14967 610 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 RPSAP08865 295 aaKnown RBP16.43■□□□□ 0.22
DDX41-201ENST00000330503 HSD17B1P14061 328 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 NPPBP16860 134 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 RPS21P63220 83 aaKnown RBP16.43■□□□□ 0.22
DDX41-201ENST00000330503 RPA4Q13156 261 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 E2F2Q14209 437 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 STARD3Q14849 445 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 TMEM259Q4ZIN3 620 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 RABL3Q5HYI8 236 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 GRHL2Q6ISB3 625 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 SLCO4C1Q6ZQN7 724 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 SPATA24Q86W54 205 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 GALNT13Q8IUC8 556 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 OXR1Q8N573 874 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 PHC3Q8NDX5 983 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 DPY30Q9C005 99 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 TRPV5Q9NQA5 729 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 CD207Q9UJ71 328 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 PIAS3Q9Y6X2 628 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 PRR23AA6NEV1 266 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 C2CD4DB7Z1M9 353 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 H3BQ06 376 aaPredicted RBP16.43■□□□□ 0.22
DDX41-201ENST00000330503 NPPAP01160 153 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 C8BP07358 591 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 MUM1Q2TAK8 710 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 METRNLQ641Q3 311 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 NANOGP8Q6NSW7 305 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 ZFP1Q6P2D0 407 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 UNC5DQ6UXZ4 953 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 PDZD3Q86UT5 571 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 RALGPS2Q86X27 583 aaPredicted RBP16.43■□□□□ 0.22
DDX41-201ENST00000330503 NEIL2Q969S2 332 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 NAF1Q96HR8 494 aaKnown RBP16.43■□□□□ 0.22
DDX41-201ENST00000330503 SGPP1Q9BX95 441 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 SLC17A9Q9BYT1 436 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 CLMPQ9H6B4 373 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 NANOGQ9H9S0 305 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 SH2B3Q9UQQ2 575 aa16.43■□□□□ 0.22
DDX41-201ENST00000330503 DNMT3AQ9Y6K1 912 aaPredicted RBP16.43■□□□□ 0.22
DDX41-201ENST00000330503 H0YIV9 168 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms