RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 CD22P20273 847 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 COL9A1P20849 921 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 SLC6A2P23975 617 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 VARSP26640 1264 aaKnown RBP14.5□□□□□ -0.09
TPM3-205ENST00000328159 ATXN3P54252 364 aaPredicted RBP14.5□□□□□ -0.09
TPM3-205ENST00000328159 RPS21P63220 83 aaKnown RBP14.5□□□□□ -0.09
TPM3-205ENST00000328159 RPA4Q13156 261 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 DOC2AQ14183 400 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 INPP5AQ14642 412 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 KIAA0040Q15053 153 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 MUM1Q2TAK8 710 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 ZFP1Q6P2D0 407 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 UNC5DQ6UXZ4 953 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 RALGPS2Q86X27 583 aaPredicted RBP14.5□□□□□ -0.09
TPM3-205ENST00000328159 TP53I13Q8NBR0 393 aaPredicted RBP14.5□□□□□ -0.09
TPM3-205ENST00000328159 OR9A1PQ8NGU1 263 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 KLK6Q92876 244 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 CMTM7Q96FZ5 175 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 C1QTNF2Q9BXJ5 285 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 ZDHHC5Q9C0B5 715 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 PCDHAC1Q9H158 963 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 OR52A5Q9H2C5 316 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 WDR26Q9H7D7 661 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 CMTM6Q9NX76 183 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 DNMT3AQ9Y6K1 912 aaPredicted RBP14.5□□□□□ -0.09
TPM3-205ENST00000328159 PIAS3Q9Y6X2 628 aa14.5□□□□□ -0.09
TPM3-205ENST00000328159 A0A1W2PQF6 199 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 PAK4O96013 591 aaPredicted RBP14.49□□□□□ -0.09
TPM3-205ENST00000328159 BCKDHAP12694 445 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 HNF4AP41235 474 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 CASP2P42575 452 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 MRPS22P82650 360 aaKnown RBP14.49□□□□□ -0.09
TPM3-205ENST00000328159 ZNF33BQ06732 778 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 SGCGQ13326 291 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 PTGR1Q14914 329 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 USP39Q53GS9 565 aaKnown RBP14.49□□□□□ -0.09
TPM3-205ENST00000328159 GRHL2Q6ISB3 625 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 CAPN13Q6MZZ7 669 aaPredicted RBP14.49□□□□□ -0.09
TPM3-205ENST00000328159 KIAA1161Q6NSJ0 714 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 SLC2A7Q6PXP3 512 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 SUSD1Q6UWL2 747 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 PDZD3Q86UT5 571 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 SPATA24Q86W54 205 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 SYTL1Q8IYJ3 562 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 OXR1Q8N573 874 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 DPP10Q8N608 796 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 OR14C36Q8NHC7 312 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 DNAJC9Q8WXX5 260 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 DPY30Q9C005 99 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 TRPV5Q9NQA5 729 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 GPRC5BQ9NZH0 403 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 SLC23A2Q9UGH3 650 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 PSMD13Q9UNM6 376 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 PCDHA9Q9Y5H5 950 aa14.49□□□□□ -0.09
TPM3-205ENST00000328159 A0A1W2PQU0 124 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 PRR23AA6NEV1 266 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 RNGTTO60942 597 aaKnown RBP14.48□□□□□ -0.09
TPM3-205ENST00000328159 NPPAP01160 153 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 DRD1P21728 446 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 TRIM23P36406 574 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 DGKQP52824 942 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 TBPL1P62380 186 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 ADGRE1Q14246 886 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 SPATS1Q496A3 300 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 TMEM259Q4ZIN3 620 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 C6orf10Q5SRN2 563 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 GLB1L3Q8NCI6 653 aaPredicted RBP14.48□□□□□ -0.09
TPM3-205ENST00000328159 WDR20Q8TBZ3 569 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 NUDT8Q8WV74 236 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 TMEM125Q96AQ2 219 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 RSRC1Q96IZ7 334 aaKnown RBP14.48□□□□□ -0.09
TPM3-205ENST00000328159 OSBPL6Q9BZF3 934 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 C8orf33Q9H7E9 229 aaPredicted RBP14.48□□□□□ -0.09
TPM3-205ENST00000328159 PHPT1Q9NRX4 125 aaPredicted RBP14.48□□□□□ -0.09
TPM3-205ENST00000328159 GMPR2Q9P2T1 348 aaKnown RBP14.48□□□□□ -0.09
TPM3-205ENST00000328159 OR1A2Q9Y585 309 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 KCNE2Q9Y6J6 123 aa14.48□□□□□ -0.09
TPM3-205ENST00000328159 C2CD4DB7Z1M9 353 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 GPR89AB7ZAQ6 455 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 H0YIV9 168 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 KMOO15229 486 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 GPR89BP0CG08 455 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 PRPS2P11908 318 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 HSD17B1P14061 328 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 MAPK1P28482 360 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 YBX1P67809 324 aaKnown RBP14.47□□□□□ -0.09
TPM3-205ENST00000328159 GRSF1Q12849 480 aaKnown RBP eCLIP14.47□□□□□ -0.09
TPM3-205ENST00000328159 CSTF3Q12996 717 aaKnown RBP14.47□□□□□ -0.09
TPM3-205ENST00000328159 SPDYE1Q8NFV5 336 aaPredicted RBP14.47□□□□□ -0.09
TPM3-205ENST00000328159 DNAJB14Q8TBM8 379 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 ZNF570Q96NI8 536 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 SGPP1Q9BX95 441 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 SLC17A9Q9BYT1 436 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 ITM2CQ9NQX7 267 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 TM7SF3Q9NS93 570 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 SLAMF8Q9P0V8 285 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 ASF1AQ9Y294 204 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 DLGAP4Q9Y2H0 992 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 TMED5Q9Y3A6 229 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 C15orf38-AP3S2A0A0A6YYH1 394 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms