RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 SPAM1P38567 509 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 SERPINB10P48595 397 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 NUDT6P53370 316 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 CYP4F8P98187 520 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 ACSM2AQ08AH3 577 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 CYP27C1Q4G0S4 372 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 ACSM2BQ68CK6 577 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 CXorf57Q6NSI4 855 aaKnown RBP12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 TMCO2Q7Z6W1 182 aaPredicted RBP12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 HIPK1Q86Z02 1210 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 SVOPLQ8N434 492 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 BEND7Q8N7W2 519 aaPredicted RBP12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 TTC29Q8NA56 475 aaPredicted RBP12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 MYLIPQ8WY64 445 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 APIPQ96GX9 242 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 ACPTQ9BZG2 426 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 REXO4Q9GZR2 422 aaKnown RBP12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 RIMKLBQ9ULI2 386 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 ABCG2Q9UNQ0 655 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 PGLSO95336 258 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 SEC24AO95486 1093 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 POU1F1P28069 291 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 SERPINA4P29622 427 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 MLLT10P55197 1068 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 P2RY8Q86VZ1 359 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 DCP2Q8IU60 420 aaKnown RBP12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 SETD9Q8NE22 299 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 PIK3C3Q8NEB9 887 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 NDNFQ8TB73 568 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 HTRA1Q92743 480 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 FATE1Q969F0 183 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 PYURFQ96I23 114 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 ATP13A3Q9H7F0 1226 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 RAPGEFL1Q9UHV5 662 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 MYO16Q9Y6X6 1858 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 TDRD15B5MCY1 1934 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 ZNF701M0R085 212 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 CLIC1O00299 241 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 ARNTLO00327 626 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 KPNA4O00629 521 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 IGSF6O95976 241 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 C1QCP02747 245 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 GBAP04062 536 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 POU2F1P14859 743 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 ZNF12P17014 697 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 ENGP17813 658 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 BCAP31P51572 246 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 DMC1Q14565 340 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 USP39Q53GS9 565 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 XKR6Q5GH73 641 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 CYP2U1Q7Z449 544 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 CLECL1Q8IZS7 167 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 GLB1L3Q8NCI6 653 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 PAPD5Q8NDF8 572 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 TMEM169Q96HH4 297 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 CSF3RQ99062 836 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 SMG9Q9H0W8 520 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 MIR1-1HGQ9H1L0 117 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 LSM7Q9UK45 103 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 TESMINQ9Y4I5 508 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 OARD1Q9Y530 152 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 H0Y858 1186 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 MT-ND2P03891 347 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 GSTM2P28161 218 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 AQP6Q13520 282 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 BTG3Q14201 252 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 SPATS1Q496A3 300 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 SYTL3Q4VX76 610 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 ZNF648Q5T619 568 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 USP51Q70EK9 711 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 SZRD1Q7Z422 152 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 KLHL23Q8NBE8 558 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 HJURPQ8NCD3 748 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 RPL3LQ92901 407 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 MBOAT4Q96T53 435 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 APOL4Q9BPW4 351 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 LHX3Q9UBR4 397 aa12.56□□□□□ -0.4
HMGCS1-201ENST00000325110 LINC00854A0A1B0GVQ3 168 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 H3BNC9 293 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 KLK8O60259 260 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 TNFRSF1BP20333 461 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 TGFBR1P36897 503 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 RXRGP48443 463 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 LRRC74AQ0VAA2 488 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 DGUOKQ16854 277 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 LRRC66Q68CR7 880 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 XAF1Q6GPH4 301 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 CEP68Q76N32 757 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 ZFP90Q8TF47 636 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 NELL1Q92832 810 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 TANKQ92844 425 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 HPS1Q92902 700 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 PLD4Q96BZ4 506 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 ZHX1-C8orf76Q96EF9 292 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 RERGLQ9H628 205 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 USE1Q9NZ43 259 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 FAM92AA1XBS5 289 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 MYO1DO94832 1006 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 OR56A5P0C7T3 313 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 FUT4P22083 530 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms