RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 ZNF627Q7L945 461 aa20.6■□□□□ 0.89
RNF40-201ENST00000324685 TMEM145Q8NBT3 493 aa20.6■□□□□ 0.89
RNF40-201ENST00000324685 GEMIN6Q8WXD5 167 aaKnown RBP20.6■□□□□ 0.89
RNF40-201ENST00000324685 SLC38A3Q99624 504 aa20.6■□□□□ 0.89
RNF40-201ENST00000324685 MLXQ9UH92 298 aa20.6■□□□□ 0.89
RNF40-201ENST00000324685 TLR6Q9Y2C9 796 aa20.6■□□□□ 0.89
RNF40-201ENST00000324685 EFNA1P20827 205 aaPredicted RBP20.59■□□□□ 0.89
RNF40-201ENST00000324685 ZNF572Q7Z3I7 529 aaPredicted RBP20.59■□□□□ 0.89
RNF40-201ENST00000324685 ARL14EPQ8N8R7 260 aaPredicted RBP20.59■□□□□ 0.89
RNF40-201ENST00000324685 MND1Q9BWT6 205 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 EOMESO95936 686 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 ABHD13Q7L211 337 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 DPEP2Q9H4A9 486 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 FLRT1Q9NZU1 646 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 MTHFD1P11586 935 aaKnown RBP20.59■□□□□ 0.89
RNF40-201ENST00000324685 SP2Q02086 613 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 WSCD2Q2TBF2 565 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 CARD16Q5EG05 197 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 ACSBG2Q5FVE4 666 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 VITQ6UXI7 678 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 CHRDL2Q6WN34 429 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 OR6K6Q8NGW6 343 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 PMEPA1Q969W9 287 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 ITPAQ9BY32 194 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 PCP4L1A6NKN8 68 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 ARPC2O15144 300 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 DUSP11O75319 330 aaKnown RBP20.59■□□□□ 0.89
RNF40-201ENST00000324685 ENTPD6O75354 484 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 TBC1D25Q3MII6 688 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 ADGRD2Q7Z7M1 963 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 SLC22A18Q96BI1 424 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 LRRC58Q96CX6 371 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 DEFB118Q96PH6 123 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 EBF4Q9BQW3 602 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 EFCAB11Q9BUY7 163 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 CPNE3O75131 537 aaKnown RBP20.59■□□□□ 0.89
RNF40-201ENST00000324685 IFNA7P01567 189 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 ZBED5Q49AG3 693 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 ALG1LQ6GMV1 187 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 TRMT10BQ6PF06 316 aaKnown RBP20.59■□□□□ 0.89
RNF40-201ENST00000324685 NRSN1Q8IZ57 195 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 INO80EQ8NBZ0 244 aaPredicted RBP20.59■□□□□ 0.89
RNF40-201ENST00000324685 FAM110BQ8TC76 370 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 POF1BQ8WVV4 589 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 NXPE2Q96DL1 559 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 NUS1Q96E22 293 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 SLC35A5Q9BS91 424 aa20.59■□□□□ 0.89
RNF40-201ENST00000324685 ILVBLA1L0T0 632 aa20.58■□□□□ 0.89
RNF40-201ENST00000324685 PUS10Q3MIT2 529 aaKnown RBP20.58■□□□□ 0.89
RNF40-201ENST00000324685 CHADLQ6NUI6 762 aa20.58■□□□□ 0.89
RNF40-201ENST00000324685 LBX2Q6XYB7 198 aa20.58■□□□□ 0.89
RNF40-201ENST00000324685 AMZ2Q86W34 360 aa20.58■□□□□ 0.89
RNF40-201ENST00000324685 SLC22A15Q8IZD6 547 aa20.58■□□□□ 0.89
RNF40-201ENST00000324685 LGI4Q8N135 537 aa20.58■□□□□ 0.89
RNF40-201ENST00000324685 GAL3ST3Q96A11 431 aa20.58■□□□□ 0.89
RNF40-201ENST00000324685 TMEM165Q9HC07 324 aa20.58■□□□□ 0.89
RNF40-201ENST00000324685 NEUROD4Q9HD90 331 aa20.58■□□□□ 0.89
RNF40-201ENST00000324685 FZD4Q9ULV1 537 aa20.58■□□□□ 0.89
RNF40-201ENST00000324685 C4orf46Q504U0 113 aa20.58■□□□□ 0.89
RNF40-201ENST00000324685 PNLDC1Q8NA58 520 aaKnown RBP20.58■□□□□ 0.89
RNF40-201ENST00000324685 ZNF527Q8NB42 609 aa20.58■□□□□ 0.89
RNF40-201ENST00000324685 ING5Q8WYH8 240 aa20.58■□□□□ 0.89
RNF40-201ENST00000324685 NCSTNQ92542 709 aa20.58■□□□□ 0.89
RNF40-201ENST00000324685 PMM1Q92871 262 aa20.58■□□□□ 0.89
RNF40-201ENST00000324685 FUBP3Q96I24 572 aaKnown RBP eCLIP20.58■□□□□ 0.89
RNF40-201ENST00000324685 LYARQ9NX58 379 aaKnown RBP20.58■□□□□ 0.89
RNF40-201ENST00000324685 TSPAN4O14817 238 aa20.58■□□□□ 0.88
RNF40-201ENST00000324685 PRKD3O94806 890 aa20.58■□□□□ 0.88
RNF40-201ENST00000324685 SP140Q13342 867 aa20.58■□□□□ 0.88
RNF40-201ENST00000324685 GFOD2Q3B7J2 385 aa20.58■□□□□ 0.88
RNF40-201ENST00000324685 COLEC12Q5KU26 742 aa20.58■□□□□ 0.88
RNF40-201ENST00000324685 MOB2Q70IA6 237 aa20.58■□□□□ 0.88
RNF40-201ENST00000324685 NAT8LQ8N9F0 302 aa20.58■□□□□ 0.88
RNF40-201ENST00000324685 DMAC2Q9NW81 257 aa20.58■□□□□ 0.88
RNF40-201ENST00000324685 VPS29Q9UBQ0 182 aa20.58■□□□□ 0.88
RNF40-201ENST00000324685 MKLN1Q9UL63 735 aa20.58■□□□□ 0.88
RNF40-201ENST00000324685 A0A1W2PRQ8 180 aa20.58■□□□□ 0.88
RNF40-201ENST00000324685 PGDP52209 483 aa20.58■□□□□ 0.88
RNF40-201ENST00000324685 ZNF782Q6ZMW2 699 aaPredicted RBP20.58■□□□□ 0.88
RNF40-201ENST00000324685 OR2AG1Q9H205 316 aa20.58■□□□□ 0.88
RNF40-201ENST00000324685 ZDHHC3Q9NYG2 299 aa20.58■□□□□ 0.88
RNF40-201ENST00000324685 MYBPHLA2RUH7 354 aa20.57■□□□□ 0.88
RNF40-201ENST00000324685 TMEM150CB9EJG8 249 aa20.57■□□□□ 0.88
RNF40-201ENST00000324685 FOXN2P32314 431 aa20.57■□□□□ 0.88
RNF40-201ENST00000324685 PRPF38BQ5VTL8 546 aaKnown RBP20.57■□□□□ 0.88
RNF40-201ENST00000324685 ZNF676Q8N7Q3 588 aa20.57■□□□□ 0.88
RNF40-201ENST00000324685 ESAMQ96AP7 390 aa20.57■□□□□ 0.88
RNF40-201ENST00000324685 MTERF1Q99551 399 aaKnown RBP20.57■□□□□ 0.88
RNF40-201ENST00000324685 CSNK2A2P19784 350 aaPredicted RBP20.57■□□□□ 0.88
RNF40-201ENST00000324685 APLP1P51693 650 aa20.57■□□□□ 0.88
RNF40-201ENST00000324685 EVX2Q03828 476 aa20.57■□□□□ 0.88
RNF40-201ENST00000324685 IQCHQ86VS3 1027 aa20.57■□□□□ 0.88
RNF40-201ENST00000324685 C1orf216Q8TAB5 229 aa20.57■□□□□ 0.88
RNF40-201ENST00000324685 PCDHAC1Q9H158 963 aa20.57■□□□□ 0.88
RNF40-201ENST00000324685 USP29Q9HBJ7 922 aa20.57■□□□□ 0.88
RNF40-201ENST00000324685 MOCS1Q9NZB8 636 aa20.57■□□□□ 0.88
RNF40-201ENST00000324685 MAU2Q9Y6X3 613 aa20.57■□□□□ 0.88
RNF40-201ENST00000324685 IGLV3-22A0A075B6J6 115 aa20.57■□□□□ 0.88
RNF40-201ENST00000324685 L7N2F9 121 aa20.57■□□□□ 0.88
RNF40-201ENST00000324685 PMM2O15305 246 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms