RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 CPSF6Q16630 551 aaKnown RBP eCLIP11.79□□□□□ -0.52
NLRC3-201ENST00000324659 SNAP47Q5SQN1 464 aa11.79□□□□□ -0.52
NLRC3-201ENST00000324659 CES5AQ6NT32 575 aa11.79□□□□□ -0.52
NLRC3-201ENST00000324659 FUT10Q6P4F1 479 aa11.79□□□□□ -0.52
NLRC3-201ENST00000324659 PRR23CQ6ZRP0 262 aa11.79□□□□□ -0.52
NLRC3-201ENST00000324659 SPATC1Q76KD6 591 aa11.79□□□□□ -0.52
NLRC3-201ENST00000324659 TAS1R1Q7RTX1 841 aa11.79□□□□□ -0.52
NLRC3-201ENST00000324659 TMEM173Q86WV6 379 aaPredicted RBP11.79□□□□□ -0.52
NLRC3-201ENST00000324659 UBE2FQ969M7 185 aa11.79□□□□□ -0.52
NLRC3-201ENST00000324659 ULK4Q96C45 1275 aa11.79□□□□□ -0.52
NLRC3-201ENST00000324659 TSSK3Q96PN8 268 aa11.79□□□□□ -0.52
NLRC3-201ENST00000324659 DEPDC7Q96QD5 511 aa11.79□□□□□ -0.52
NLRC3-201ENST00000324659 REXO4Q9GZR2 422 aaKnown RBP11.79□□□□□ -0.52
NLRC3-201ENST00000324659 C6orf62Q9GZU0 229 aaPredicted RBP11.79□□□□□ -0.52
NLRC3-201ENST00000324659 RMND5AQ9H871 391 aa11.79□□□□□ -0.52
NLRC3-201ENST00000324659 MAGEE1Q9HCI5 957 aa11.79□□□□□ -0.52
NLRC3-201ENST00000324659 VNN3Q9NY84 501 aa11.79□□□□□ -0.52
NLRC3-201ENST00000324659 AGO1Q9UL18 857 aaKnown RBP11.79□□□□□ -0.52
NLRC3-201ENST00000324659 EIF3LQ9Y262 564 aaKnown RBP11.79□□□□□ -0.52
NLRC3-201ENST00000324659 TDRD15B5MCY1 1934 aaKnown RBP11.78□□□□□ -0.52
NLRC3-201ENST00000324659 IGLV3-10A0A075B6K4 115 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 FFAR2O15552 330 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 PRLP01236 227 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 ALOX12P18054 663 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 GTF2E2P29084 291 aaKnown RBP11.78□□□□□ -0.52
NLRC3-201ENST00000324659 IFNA8P32881 189 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 ISL1P61371 349 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 ADPRMQ3LIE5 342 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 LRIT3Q3SXY7 679 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 SPATS1Q496A3 300 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 RTP2Q5QGT7 225 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 MUL1Q969V5 352 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 IRF2BPLQ9H1B7 796 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 CRISPLD1Q9H336 500 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 LATS2Q9NRM7 1088 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 HEBP1Q9NRV9 189 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 SLCO3A1Q9UIG8 710 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 ZNF490Q9ULM2 529 aaPredicted RBP11.78□□□□□ -0.52
NLRC3-201ENST00000324659 PCDHB9Q9Y5E1 797 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 ANKRD28O15084 1053 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 NUAK1O60285 661 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 CREG1O75629 220 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 SERPINB10P48595 397 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 SLC11A1P49279 550 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 SGSHP51688 502 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 DGUOKQ16854 277 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 PLD3Q8IV08 490 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 ADHFE1Q8IWW8 467 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 MSRB3Q8IXL7 192 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 S100ZQ8WXG8 99 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 DEFB118Q96PH6 123 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 PSD2Q9BQI7 771 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 INPP5KQ9BT40 448 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 GPR63Q9BZJ6 419 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 DNMT3BQ9UBC3 853 aaKnown RBP11.78□□□□□ -0.52
NLRC3-201ENST00000324659 CAB39Q9Y376 341 aaPredicted RBP11.78□□□□□ -0.52
NLRC3-201ENST00000324659 GREB1Q4ZG55 1949 aa11.78□□□□□ -0.52
NLRC3-201ENST00000324659 TRIM64BA6NI03 449 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 PRMT5O14744 637 aaPredicted RBP11.77□□□□□ -0.52
NLRC3-201ENST00000324659 RFPL2O75678 378 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 GJB5O95377 273 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 EPOP01588 193 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 IGFBP5P24593 272 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 EPHA2P29317 976 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 CDK5R2Q13319 367 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 MBTPS1Q14703 1052 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 NPTX1Q15818 432 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 COLEC12Q5KU26 742 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 FAAH2Q6GMR7 532 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 NEK5Q6P3R8 708 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 SUSD1Q6UWL2 747 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 LKAAEAR1Q8TD35 194 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 CAPNS2Q96L46 248 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 PDFQ9HBH1 243 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 ELOVL2Q9NXB9 296 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 PCDHB14Q9Y5E9 798 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 CEP290O15078 2479 aa11.77□□□□□ -0.52
NLRC3-201ENST00000324659 KRT87PA6NCN2 255 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 ADAM12O43184 909 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 NBNO60934 754 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 YBEYP58557 167 aaPredicted RBP11.77□□□□□ -0.53
NLRC3-201ENST00000324659 TRAF3Q13114 568 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 ARHGEF7Q14155 803 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 CATSPEREQ5SY80 951 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 ATXN7L2Q5T6C5 722 aaPredicted RBP11.77□□□□□ -0.53
NLRC3-201ENST00000324659 MRPL10Q7Z7H8 261 aaKnown RBP11.77□□□□□ -0.53
NLRC3-201ENST00000324659 DCP2Q8IU60 420 aaKnown RBP11.77□□□□□ -0.53
NLRC3-201ENST00000324659 ZNF540Q8NDQ6 660 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 FAR1Q8WVX9 515 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 ATL1Q8WXF7 558 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 AMBNQ9NP70 447 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 ADPRHL2Q9NX46 363 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 FNIP2Q9P278 1114 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 HTTP42858 3142 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 KNL1Q8NG31 2342 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.77□□□□□ -0.53
NLRC3-201ENST00000324659 PDZK1P1A8MUH7 402 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 ANKRD66B4E2M5 251 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 ULK1O75385 1050 aa11.77□□□□□ -0.53
NLRC3-201ENST00000324659 OTCP00480 354 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms