RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TSPEARQ8WU66 669 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 GTPBP3Q969Y2 492 aaKnown RBP6.91□□□□□ -1.3
SMC1A-201ENST00000322213 PTERQ96BW5 349 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 THG1LQ9NWX6 298 aaKnown RBP6.91□□□□□ -1.3
SMC1A-201ENST00000322213 TMEM150BA6NC51 233 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 L7N2F9 121 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 RAB36O95755 333 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 GNAO1P09471 354 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 GRIA1P42261 906 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 PTGR1Q14914 329 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 COQ5Q5HYK3 327 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 ANKRD54Q6NXT1 300 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 STRADAQ7RTN6 431 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 OAFQ86UD1 273 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 DENND6BQ8NEG7 585 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 SLC35B2Q8TB61 432 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 USP7Q93009 1102 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 IL20Q9NYY1 176 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 MALT1Q9UDY8 824 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 CNTNAP4Q9C0A0 1308 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 ACKR2O00590 384 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 FOXD2O60548 495 aaPredicted RBP6.91□□□□□ -1.3
SMC1A-201ENST00000322213 SNX4O95219 450 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 EPCAMP16422 314 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 AQP1P29972 269 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 PRKAR1BP31321 381 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 BMXP51813 675 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 ARHGDIBP52566 201 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 HNRNPA0Q13151 305 aaKnown RBP6.91□□□□□ -1.3
SMC1A-201ENST00000322213 NDUFA9Q16795 377 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 BRMS1LQ5PSV4 323 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 MOB2Q70IA6 237 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 SMIM5Q71RC9 77 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 CHST15Q7LFX5 561 aaPredicted RBP6.91□□□□□ -1.3
SMC1A-201ENST00000322213 CEP76Q8TAP6 659 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 FBXO32Q969P5 355 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 BIRC7Q96CA5 298 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 TMEM80Q96HE8 168 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 TM9SF2Q99805 663 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 SMURF2Q9HAU4 748 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 MEMO1Q9Y316 297 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 C1orf167Q5SNV9 1468 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 MAP2K3P46734 347 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 CDH8P55286 799 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 RNASE12Q5GAN4 147 aaKnown RBP6.91□□□□□ -1.3
SMC1A-201ENST00000322213 ULK3Q6PHR2 472 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 FAM35AQ86V20 835 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 KLHL36Q8N4N3 616 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 OR8J3Q8NGG0 315 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 LENG9Q96B70 501 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 ATXN3LQ9H3M9 355 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 C3orf14Q9HBI5 128 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 FKBP7Q9Y680 259 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 AGAP5A6NIR3 686 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 NME6O75414 186 aaPredicted RBP6.91□□□□□ -1.3
SMC1A-201ENST00000322213 FAM163BP0C2L3 166 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 S100GP29377 79 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 MAP2K4P45985 399 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 CDH12P55289 794 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 TBX4P57082 545 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 BTN3A2P78410 334 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 SLC22A10Q63ZE4 541 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 LRRC66Q68CR7 880 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF425Q6IV72 752 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 LCN8Q6JVE9 175 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 DCLRE1AQ6PJP8 1040 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 SLC22A17Q8WUG5 538 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 EDEM1Q92611 657 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 CTRCQ99895 268 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 BEX2Q9BXY8 128 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 ST6GALNAC4Q9H4F1 302 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 TRIM36Q9NQ86 728 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 TCAF1Q9Y4C2 921 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 PCDHGB1Q9Y5G3 927 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 FXYD6-FXYD2A0A087WZ82 144 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 GRID2O43424 1007 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 ACSL4O60488 711 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 CDC40O60508 579 aaKnown RBP eCLIP6.91□□□□□ -1.3
SMC1A-201ENST00000322213 NMBRP28336 390 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 HUNKP57058 714 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 TXNL4AP83876 142 aaKnown RBP6.91□□□□□ -1.3
SMC1A-201ENST00000322213 PRKCDQ05655 676 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 SLC13A2Q13183 592 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 XKR6Q5GH73 641 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 MSANTD2Q6P1R3 559 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 RBFAQ8N0V3 343 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 CRAMP1Q96RY5 1269 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 ELOVL4Q9GZR5 314 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 FXYD6Q9H0Q3 95 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 PRDM12Q9H4Q4 367 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 BRD7Q9NPI1 651 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 HCN2Q9UL51 889 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 GREB1LQ9C091 1923 aaPredicted RBP6.91□□□□□ -1.3
SMC1A-201ENST00000322213 PRSS44E7EML9 344 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF432O94892 652 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 ALDH1A1P00352 501 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 CD48P09326 243 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 ANXA8P13928 327 aa6.91□□□□□ -1.3
SMC1A-201ENST00000322213 BOP1Q14137 746 aaKnown RBP6.91□□□□□ -1.3
SMC1A-201ENST00000322213 FAM196AQ6ZSG2 479 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms