RNA–Protein interactions for RNA: ENST00000321143.8

HCCS-201, Transcript of holocytochrome c synthase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HCCS, Length 2,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCS-201ENST00000321143 S100A3P33764 101 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 SHMT2P34897 504 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 NEK2P51955 445 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 IST1P53990 364 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 NUP107P57740 925 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 GBX1Q14549 363 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 SLC44A4Q53GD3 710 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 LRIF1Q5T3J3 769 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 ZDHHC20Q5W0Z9 365 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 DPY19L3Q6ZPD9 716 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 GPR149Q86SP6 731 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 MRPL43Q8N983 215 aaKnown RBP18.48■□□□□ 0.55
HCCS-201ENST00000321143 PNPT1Q8TCS8 783 aaKnown RBP18.48■□□□□ 0.55
HCCS-201ENST00000321143 ASB11Q8WXH4 323 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 NCLNQ969V3 563 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 CPPED1Q9BRF8 314 aaPredicted RBP18.48■□□□□ 0.55
HCCS-201ENST00000321143 CPEB1Q9BZB8 566 aaKnown RBP18.48■□□□□ 0.55
HCCS-201ENST00000321143 BRD9Q9H8M2 597 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 HCFC1R1Q9NWW0 138 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 MBD1Q9UIS9 605 aaPredicted RBP18.48■□□□□ 0.55
HCCS-201ENST00000321143 UTS2RQ9UKP6 389 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 MAN2B2Q9Y2E5 1009 aa18.48■□□□□ 0.55
HCCS-201ENST00000321143 PLXNB3Q9ULL4 1909 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 NOTCH4Q99466 2003 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 A0A096LPI6 279 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 GNGT2O14610 69 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 NUAK1O60285 661 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 CREG1O75629 220 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 NRIP1P48552 1158 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 SPINT3P49223 89 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 PON2Q15165 354 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 CARD16Q5EG05 197 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 LRRC73Q5JTD7 316 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 CHST15Q7LFX5 561 aaPredicted RBP18.47■□□□□ 0.55
HCCS-201ENST00000321143 CALHM3Q86XJ0 350 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 PLPP6Q8IY26 295 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 ABHD8Q96I13 439 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 RDH12Q96NR8 316 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 ING2Q9H160 280 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 TOR3AQ9H497 397 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 RMND5AQ9H871 391 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 SERHLQ9NQF3 203 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 DCAF13Q9NV06 445 aaKnown RBP18.47■□□□□ 0.55
HCCS-201ENST00000321143 B4GALT6Q9UBX8 382 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 TMPRSS11EQ9UL52 423 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 ATG2AQ2TAZ0 1938 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 PABPN1LA6NDY0 278 aaKnown RBP18.47■□□□□ 0.55
HCCS-201ENST00000321143 POP4O95707 220 aaKnown RBP18.47■□□□□ 0.55
HCCS-201ENST00000321143 C8AP07357 584 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 RETP07949 1114 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 MPC1LP0DKB6 136 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 SLC6A12P48065 614 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 HNMTP50135 292 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 DCTN2Q13561 401 aaKnown RBP18.47■□□□□ 0.55
HCCS-201ENST00000321143 LAPTM5Q13571 262 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 PTCHD3Q3KNS1 767 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 VRK3Q8IV63 474 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 FAM9CQ8IZT9 166 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 TMEM132CQ8N3T6 1108 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 ZNF420Q8TAQ5 688 aaPredicted RBP18.47■□□□□ 0.55
HCCS-201ENST00000321143 PYCR2Q96C36 320 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 FAM120BQ96EK7 910 aaKnown RBP18.47■□□□□ 0.55
HCCS-201ENST00000321143 AURKBQ96GD4 344 aaPredicted RBP18.47■□□□□ 0.55
HCCS-201ENST00000321143 ITCHQ96J02 903 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 ZNF641Q96N77 438 aaPredicted RBP18.47■□□□□ 0.55
HCCS-201ENST00000321143 TSSK3Q96PN8 268 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 SMURF2Q9HAU4 748 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 CD84Q9UIB8 345 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 SLC25A13Q9UJS0 675 aa18.47■□□□□ 0.55
HCCS-201ENST00000321143 C16orf96A6NNT2 1141 aa18.46■□□□□ 0.55
HCCS-201ENST00000321143 CCL16O15467 120 aa18.46■□□□□ 0.55
HCCS-201ENST00000321143 PRPH2P23942 346 aa18.46■□□□□ 0.55
HCCS-201ENST00000321143 BOP1Q14137 746 aaKnown RBP18.46■□□□□ 0.55
HCCS-201ENST00000321143 GPR107Q5VW38 600 aa18.46■□□□□ 0.55
HCCS-201ENST00000321143 NEK5Q6P3R8 708 aa18.46■□□□□ 0.55
HCCS-201ENST00000321143 RBM23Q86U06 439 aaKnown RBP18.46■□□□□ 0.55
HCCS-201ENST00000321143 SVOPLQ8N434 492 aa18.46■□□□□ 0.55
HCCS-201ENST00000321143 BEND7Q8N7W2 519 aaPredicted RBP18.46■□□□□ 0.55
HCCS-201ENST00000321143 L3MBTL4Q8NA19 623 aa18.46■□□□□ 0.55
HCCS-201ENST00000321143 KREMEN2Q8NCW0 462 aa18.46■□□□□ 0.55
HCCS-201ENST00000321143 CMTM7Q96FZ5 175 aa18.46■□□□□ 0.55
HCCS-201ENST00000321143 PHF12Q96QT6 1004 aa18.46■□□□□ 0.55
HCCS-201ENST00000321143 INPP5KQ9BT40 448 aa18.46■□□□□ 0.55
HCCS-201ENST00000321143 OSBPL10Q9BXB5 764 aa18.46■□□□□ 0.55
HCCS-201ENST00000321143 SLC46A2Q9BY10 475 aa18.46■□□□□ 0.55
HCCS-201ENST00000321143 GSNP06396 782 aa18.46■□□□□ 0.54
HCCS-201ENST00000321143 ATP1B2P14415 290 aaPredicted RBP18.46■□□□□ 0.54
HCCS-201ENST00000321143 EEF1B2P24534 225 aaKnown RBP18.46■□□□□ 0.54
HCCS-201ENST00000321143 TACR1P25103 407 aa18.46■□□□□ 0.54
HCCS-201ENST00000321143 DCKP27707 260 aa18.46■□□□□ 0.54
HCCS-201ENST00000321143 MAPK1P28482 360 aa18.46■□□□□ 0.54
HCCS-201ENST00000321143 GZMMP51124 257 aa18.46■□□□□ 0.54
HCCS-201ENST00000321143 NEDD8Q15843 81 aa18.46■□□□□ 0.54
HCCS-201ENST00000321143 LRRC23Q53EV4 343 aaPredicted RBP18.46■□□□□ 0.54
HCCS-201ENST00000321143 TTC23Q5W5X9 447 aa18.46■□□□□ 0.54
HCCS-201ENST00000321143 ZNF773Q6PK81 442 aa18.46■□□□□ 0.54
HCCS-201ENST00000321143 THAP5Q7Z6K1 395 aa18.46■□□□□ 0.54
HCCS-201ENST00000321143 ANKRD46Q86W74 232 aa18.46■□□□□ 0.54
HCCS-201ENST00000321143 MAGIXQ9H6Y5 334 aa18.46■□□□□ 0.54
HCCS-201ENST00000321143 HPS4Q9NQG7 708 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms