RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 ARHGAP19Q14CB8 494 aa28.1■■■□□ 2.09
SYNGR1-202ENST00000318801 GALNT7Q86SF2 657 aa28.1■■■□□ 2.09
SYNGR1-202ENST00000318801 CNTN4Q8IWV2 1026 aa28.1■■■□□ 2.09
SYNGR1-202ENST00000318801 FAM60AQ9NP50 221 aa28.1■■■□□ 2.09
SYNGR1-202ENST00000318801 WHRNQ9P202 907 aa28.1■■■□□ 2.09
SYNGR1-202ENST00000318801 PCM1Q15154 2024 aa28.09■■■□□ 2.09
SYNGR1-202ENST00000318801 ATRXP46100 2492 aa28.09■■■□□ 2.09
SYNGR1-202ENST00000318801 ZNF749O43361 778 aa28.09■■■□□ 2.09
SYNGR1-202ENST00000318801 MAGP20916 626 aa28.09■■■□□ 2.09
SYNGR1-202ENST00000318801 LY6DQ14210 128 aa28.09■■■□□ 2.09
SYNGR1-202ENST00000318801 TLDC1Q6P9B6 456 aa28.09■■■□□ 2.09
SYNGR1-202ENST00000318801 PCSK4Q6UW60 755 aa28.09■■■□□ 2.09
SYNGR1-202ENST00000318801 LMNTD1Q8N9Z9 388 aa28.09■■■□□ 2.09
SYNGR1-202ENST00000318801 DENND1AQ8TEH3 1009 aa28.09■■■□□ 2.09
SYNGR1-202ENST00000318801 CORO1CQ9ULV4 474 aaPredicted RBP28.09■■■□□ 2.09
SYNGR1-202ENST00000318801 SNRNP200O75643 2136 aaKnown RBP28.09■■■□□ 2.09
SYNGR1-202ENST00000318801 TARM1B6A8C7 271 aa28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 CREG1O75629 220 aa28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 CKAP4Q07065 602 aaKnown RBP28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 GPS2Q13227 327 aa28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 CUL1Q13616 776 aa28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 FRG1Q14331 258 aaKnown RBP28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 ZIC1Q15915 447 aa28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 CYP2A13Q16696 494 aa28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 CCSMST1Q4G0I0 132 aa28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 FAM199XQ6PEV8 388 aaPredicted RBP28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 FIGLAQ6QHK4 219 aa28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 ASB11Q8WXH4 323 aa28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 SMPDL3AQ92484 453 aa28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 PWWP2AQ96N64 755 aa28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 C17orf62Q9BQA9 187 aa28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 RAB17Q9H0T7 212 aa28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 SRPK3Q9UPE1 567 aa28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 FARSAQ9Y285 508 aaKnown RBP28.08■■■□□ 2.09
SYNGR1-202ENST00000318801 ARHGEF33A8MVX0 844 aa28.07■■■□□ 2.08
SYNGR1-202ENST00000318801 AHSGP02765 367 aa28.07■■■□□ 2.08
SYNGR1-202ENST00000318801 F8A1P23610 371 aa28.07■■■□□ 2.08
SYNGR1-202ENST00000318801 PTPN4P29074 926 aa28.07■■■□□ 2.08
SYNGR1-202ENST00000318801 ERV3-1Q14264 604 aa28.07■■■□□ 2.08
SYNGR1-202ENST00000318801 TEDDM1Q5T9Z0 273 aa28.07■■■□□ 2.08
SYNGR1-202ENST00000318801 ANKMY2Q8IV38 441 aa28.07■■■□□ 2.08
SYNGR1-202ENST00000318801 DSELQ8IZU8 1212 aa28.07■■■□□ 2.08
SYNGR1-202ENST00000318801 DNAJC22Q8N4W6 341 aa28.07■■■□□ 2.08
SYNGR1-202ENST00000318801 SLC38A9Q8NBW4 561 aa28.07■■■□□ 2.08
SYNGR1-202ENST00000318801 FBXO15Q8NCQ5 510 aaPredicted RBP28.07■■■□□ 2.08
SYNGR1-202ENST00000318801 CD200R1Q8TD46 325 aa28.07■■■□□ 2.08
SYNGR1-202ENST00000318801 NDC1Q9BTX1 674 aa28.07■■■□□ 2.08
SYNGR1-202ENST00000318801 UTP6Q9NYH9 597 aaKnown RBP28.07■■■□□ 2.08
SYNGR1-202ENST00000318801 ZFATQ9P243 1243 aa28.07■■■□□ 2.08
SYNGR1-202ENST00000318801 MRPS18BQ9Y676 258 aaKnown RBP28.07■■■□□ 2.08
SYNGR1-202ENST00000318801 MYO1CO00159 1063 aa28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 TERTO14746 1132 aaKnown RBP28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 SYF2O95926 243 aaKnown RBP28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 F7P08709 466 aaPredicted RBP28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 CMPK1P30085 196 aa28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 RPA3P35244 121 aaPredicted RBP28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 C2orf54Q08AI8 447 aa28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 LINC00303Q3SY05 128 aa28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 STEAP4Q687X5 459 aa28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 FBXO36Q8NEA4 188 aa28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 APOBEC4Q8WW27 367 aaKnown RBP28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 NDNQ99608 321 aa28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 SLC30A3Q99726 388 aa28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 DPH5Q9H2P9 285 aa28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 ACTL8Q9H568 366 aa28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 TXLNGQ9NUQ3 528 aa28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 EURLQ9NYK6 297 aa28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 MED16Q9Y2X0 877 aa28.06■■■□□ 2.08
SYNGR1-202ENST00000318801 C9J4A7 227 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 ZSCAN9O15535 394 aaPredicted RBP28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 MCM3P25205 808 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 CAV1Q03135 178 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 MGAT5Q09328 741 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 ILF2Q12905 390 aaKnown RBP28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 TSTA3Q13630 321 aaPredicted RBP28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 DEFB110Q30KQ9 67 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 DEFB109BQ30KR1 87 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 PRAMEF17Q5VTA0 474 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 ZNF517Q6ZMY9 492 aaPredicted RBP28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 MCATQ8IVS2 390 aaKnown RBP28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 FAM20CQ8IXL6 584 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 CPNE9Q8IYJ1 553 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 SYTL1Q8IYJ3 562 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 ZBED8Q8IZ13 594 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 GIMAP7Q8NHV1 300 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 MCOLN3Q8TDD5 553 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 PYROXD1Q8WU10 500 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 MIPEPQ99797 713 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 CHST8Q9H2A9 424 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 ADNPQ9H2P0 1102 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 NSMCE4AQ9NXX6 385 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 POLHQ9Y253 713 aa28.05■■■□□ 2.08
SYNGR1-202ENST00000318801 PABPN1LA6NDY0 278 aaKnown RBP28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 GFYI3L273 518 aa28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 RAD51CO43502 376 aa28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 PRICKLE3O43900 615 aaPredicted RBP28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 CD63P08962 238 aa28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 RAB40ALP0C0E4 278 aa28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 PDAP1Q13442 181 aaKnown RBP28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 TCTE1Q5JU00 501 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms