RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 COL9A1P20849 921 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 NTSR1P30989 418 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 RGS19P49795 217 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 CCINQ13939 588 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 TMEM220Q6QAJ8 160 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 AGTRAPQ6RW13 159 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 OR8J2Q8NGG1 315 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 GTF2H4Q92759 462 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 EXT2Q93063 718 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 POP5Q969H6 163 aaKnown RBP6.96□□□□□ -1.3
NPHP1-201ENST00000316534 TBC1D20Q96BZ9 403 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 TUBGCP3Q96CW5 907 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 CXorf40BQ96DE9 158 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 LRCH3Q96II8 777 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 PAIP1Q9H074 479 aaKnown RBP6.96□□□□□ -1.3
NPHP1-201ENST00000316534 TTYH1Q9H313 450 aaPredicted RBP6.96□□□□□ -1.3
NPHP1-201ENST00000316534 PELI2Q9HAT8 420 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 ITM2CQ9NQX7 267 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 USP36Q9P275 1121 aaKnown RBP6.96□□□□□ -1.3
NPHP1-201ENST00000316534 BCAP29Q9UHQ4 241 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 PCDHB3Q9Y5E6 796 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 TMEM131Q92545 1883 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 TRIM64BA6NI03 449 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 AIM2O14862 343 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 MMP20O60882 483 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 TBX6O95947 436 aaPredicted RBP6.96□□□□□ -1.3
NPHP1-201ENST00000316534 FUCA1P04066 466 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 SEMG1P04279 462 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 G6PDP11413 515 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 ITGB6P18564 788 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 PDHA2P29803 388 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 SLC7A1P30825 629 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 GDI1P31150 447 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 CTHP32929 405 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 GDF5P43026 501 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 GNPDA1P46926 289 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 WNT3P56703 355 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 STX1BP61266 288 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 C1orf146Q5VVC0 180 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 CES5AQ6NT32 575 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 NUDT18Q6ZVK8 323 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 FKBP9P1Q75LS8 142 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 LPCAT2Q7L5N7 544 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 TRMT11Q7Z4G4 463 aaKnown RBP6.96□□□□□ -1.3
NPHP1-201ENST00000316534 ABHD11Q8NFV4 315 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 OR9A1PQ8NGU1 263 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 OR5K2Q8NHB8 316 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 CXorf40AQ8TE69 158 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 ZNF480Q8WV37 535 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 ESAMQ96AP7 390 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 GORASP2Q9H8Y8 452 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 FARSBQ9NSD9 589 aaKnown RBP6.96□□□□□ -1.3
NPHP1-201ENST00000316534 GID8Q9NWU2 228 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 ARL15Q9NXU5 204 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 CCDC167Q9P0B6 97 aa6.96□□□□□ -1.3
NPHP1-201ENST00000316534 ZNF490Q9ULM2 529 aaPredicted RBP6.96□□□□□ -1.3
NPHP1-201ENST00000316534 ATP6AP2A0A1C7CYW4 349 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 E9PQ18 207 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 MID1O15344 667 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 LATO43561 262 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 ATP6AP2O75787 350 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 PIK3CBP42338 1070 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 GSTM5P46439 218 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 RPS21P63220 83 aaKnown RBP6.95□□□□□ -1.3
NPHP1-201ENST00000316534 ADGRE1Q14246 886 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 AP5B1Q2VPB7 878 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 CCSMST1Q4G0I0 132 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 RUNDC3AQ59EK9 446 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 NXNQ6DKJ4 435 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 IL27RAQ6UWB1 636 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 HID1Q8IV36 788 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 MMAAQ8IVH4 418 aaKnown RBP6.95□□□□□ -1.3
NPHP1-201ENST00000316534 LILRA2Q8N149 483 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 LILRA3Q8N6C8 439 aaPredicted RBP6.95□□□□□ -1.3
NPHP1-201ENST00000316534 ZNF366Q8N895 744 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 ANKFN1Q8N957 763 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 NAT14Q8WUY8 206 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 COQ8BQ96D53 544 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 PPP1R36Q96LQ0 422 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 BTBD9Q96Q07 612 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 BTBD1Q9H0C5 482 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 SARS2Q9NP81 518 aaKnown RBP6.95□□□□□ -1.3
NPHP1-201ENST00000316534 CCM2LQ9NUG4 571 aaPredicted RBP6.95□□□□□ -1.3
NPHP1-201ENST00000316534 MAPRE3Q9UPY8 281 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 COQ6Q9Y2Z9 468 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 CDH23Q9H251 3354 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 EML5Q05BV3 1969 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 KPNA3O00505 521 aaPredicted RBP6.95□□□□□ -1.3
NPHP1-201ENST00000316534 ULK1O75385 1050 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 KRT6AP02538 564 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 CATP04040 527 aaKnown RBP6.95□□□□□ -1.3
NPHP1-201ENST00000316534 KRT6BP04259 564 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 CEACAM5P06731 702 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 SERPINB1P30740 379 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 KRT6CP48668 564 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 ADPRHP54922 357 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 PHC1P78364 1004 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 PRKG2Q13237 762 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 IRF4Q15306 451 aa6.95□□□□□ -1.3
NPHP1-201ENST00000316534 C6orf163Q5TEZ5 329 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms