RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 GUCA1CO95843 209 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 C9P02748 559 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 ABHD2P08910 425 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 C1QTNF9P0C862 333 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 CCDC166P0CW27 439 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 CD9P21926 228 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 PRDX3P30048 256 aaKnown RBP7.6□□□□□ -1.19
CDC42-201ENST00000315554 CCKBRP32239 447 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 HSD17B3P37058 310 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 CCNFP41002 786 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 SLCO1A2P46721 670 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 RAB28P51157 221 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 RAB10P61026 200 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 YBX1P67809 324 aaKnown RBP7.6□□□□□ -1.19
CDC42-201ENST00000315554 SH3BP2P78314 561 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 CYP4F3Q08477 520 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 DLG1Q12959 904 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 CSHL1Q14406 222 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 ZKSCAN8Q15776 578 aaPredicted RBP7.6□□□□□ -1.19
CDC42-201ENST00000315554 WDR93Q6P2C0 686 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 SUSD1Q6UWL2 747 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 ARHGAP22Q7Z5H3 698 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 NKAPQ8N5F7 415 aaKnown RBP7.6□□□□□ -1.19
CDC42-201ENST00000315554 EIF1ADQ8N9N8 165 aaKnown RBP7.6□□□□□ -1.19
CDC42-201ENST00000315554 OR9A1PQ8NGU1 263 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 OR2L8Q8NGY9 312 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 WDR36Q8NI36 951 aaKnown RBP7.6□□□□□ -1.19
CDC42-201ENST00000315554 AENQ8WTP8 325 aaKnown RBP7.6□□□□□ -1.19
CDC42-201ENST00000315554 EXT2Q93063 718 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 THAP11Q96EK4 314 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 TSPAN17Q96FV3 270 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 ZDHHC12Q96GR4 267 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 LIN37Q96GY3 246 aaPredicted RBP7.6□□□□□ -1.19
CDC42-201ENST00000315554 OR2A14Q96R47 310 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 CTRCQ99895 268 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 DPYSL5Q9BPU6 564 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 ACAT2Q9BWD1 397 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 VPS11Q9H270 941 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 SNX15Q9NRS6 342 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 CTNNAL1Q9UBT7 734 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 POMT2Q9UKY4 750 aa7.6□□□□□ -1.19
CDC42-201ENST00000315554 FAM221BA6H8Z2 402 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 NCF1BA6NI72 391 aaPredicted RBP7.59□□□□□ -1.19
CDC42-201ENST00000315554 NCF1CA8MVU1 366 aaPredicted RBP7.59□□□□□ -1.19
CDC42-201ENST00000315554 C2orf74A8MZ97 194 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 MYO1CO00159 1063 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 EIF3FO00303 357 aaPredicted RBP7.59□□□□□ -1.19
CDC42-201ENST00000315554 PLD2O14939 933 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 KDM1AO60341 852 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 BRINP1O60477 761 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 TNFSF15O95150 251 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 WISP3O95389 354 aaPredicted RBP7.59□□□□□ -1.19
CDC42-201ENST00000315554 SLC16A8O95907 504 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 ALDOAP04075 364 aaKnown RBP7.59□□□□□ -1.19
CDC42-201ENST00000315554 C8GP07360 202 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 JMJD7P0C870 316 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 EBLN1P0CF75 366 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 SLC35E2BP0CK96 405 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 FGF3P11487 239 aaPredicted RBP7.59□□□□□ -1.19
CDC42-201ENST00000315554 NCF1P14598 390 aaPredicted RBP7.59□□□□□ -1.19
CDC42-201ENST00000315554 CD1DP15813 335 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 ST6GAL1P15907 406 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 CYP2A7P20853 494 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 CSTF2P33240 577 aaKnown RBP eCLIP7.59□□□□□ -1.19
CDC42-201ENST00000315554 ARL4DP49703 201 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 TUBB4BP68371 445 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 SHC2P98077 582 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 FOXM1Q08050 763 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 OR4D1Q15615 310 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 TSNQ15631 228 aaKnown RBP7.59□□□□□ -1.19
CDC42-201ENST00000315554 CLPPQ16740 277 aaPredicted RBP7.59□□□□□ -1.19
CDC42-201ENST00000315554 C18orf21Q32NC0 220 aaPredicted RBP7.59□□□□□ -1.19
CDC42-201ENST00000315554 FBXO48Q5FWF7 155 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 ANKS6Q68DC2 871 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 SPESP1Q6UW49 350 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 SBSNQ6UWP8 590 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 PRSS42Q7Z5A4 293 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 RASGRP3Q8IV61 690 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 SYTL1Q8IYJ3 562 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 AGBL5Q8NDL9 886 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 FLVCR1-AS1Q8TAF5 88 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 MAGEC3Q8TD91 643 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 MCOLN3Q8TDD5 553 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 EPS8L3Q8TE67 593 aaKnown RBP7.59□□□□□ -1.19
CDC42-201ENST00000315554 ZNF480Q8WV37 535 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 KCTD4Q8WVF5 259 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 GATA6Q92908 595 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 NXNL1Q96CM4 212 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 PRR11Q96HE9 360 aaPredicted RBP7.59□□□□□ -1.19
CDC42-201ENST00000315554 MIPEPQ99797 713 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 SLC12A9Q9BXP2 914 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 ATG10Q9H0Y0 220 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 POLR1BQ9H9Y6 1135 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 PARVBQ9HBI1 364 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 POPDC3Q9HBV1 291 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 SYTL2Q9HCH5 934 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 APMAPQ9HDC9 416 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 SOHLH2Q9NX45 425 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 OR6C2Q9NZP2 312 aa7.59□□□□□ -1.19
CDC42-201ENST00000315554 SPATA7Q9P0W8 599 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms