RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 TRAPPC5Q8IUR0 188 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 ETFBKMTQ8IXQ9 262 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 C2orf73Q8N5S3 287 aaPredicted RBP12.09□□□□□ -0.47
RNF4-201ENST00000314289 TRAM1L1Q8N609 369 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 MCOLN3Q8TDD5 553 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 LZICQ8WZA0 190 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 TMEM159Q96B96 161 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 TBCDQ9BTW9 1192 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 ZSCAN5AQ9BUG6 496 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 NTMT1Q9BV86 223 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 SLC2A11Q9BYW1 496 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 IKZF5Q9H5V7 419 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 MRPL40Q9NQ50 206 aaKnown RBP12.09□□□□□ -0.47
RNF4-201ENST00000314289 SLC6A13Q9NSD5 602 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 VAPAQ9P0L0 249 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 LRRK1Q38SD2 2015 aa12.08□□□□□ -0.47
RNF4-201ENST00000314289 SPEGQ15772 3267 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 KANSL1LA0AUZ9 987 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 EPOPA6NHQ4 379 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 C1QCP02747 245 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 ZNF26P17031 533 aaPredicted RBP12.08□□□□□ -0.48
RNF4-201ENST00000314289 VARSP26640 1264 aaKnown RBP12.08□□□□□ -0.48
RNF4-201ENST00000314289 NAA20P61599 178 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 TRAP1Q12931 704 aaKnown RBP12.08□□□□□ -0.48
RNF4-201ENST00000314289 NAE1Q13564 534 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 C16orf72Q14CZ0 275 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 PDE12Q6L8Q7 609 aaKnown RBP12.08□□□□□ -0.48
RNF4-201ENST00000314289 DOK6Q6PKX4 331 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 DLEU7Q6UYE1 221 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 DPPA4Q7L190 304 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 ZNF554Q86TJ5 538 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 CHERPQ8IWX8 916 aaKnown RBP12.08□□□□□ -0.48
RNF4-201ENST00000314289 CFAP206Q8IYR0 622 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 APIPQ96GX9 242 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 PPP3R2Q96LZ3 170 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 SAMD11Q96NU1 681 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 PBX4Q9BYU1 374 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 DPY30Q9C005 99 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 EIF3LQ9Y262 564 aaKnown RBP12.08□□□□□ -0.48
RNF4-201ENST00000314289 DHRS12A0PJE2 317 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 E7EQ34 232 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 BOLA2-SMG1P6H3BVE0 249 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 LINC01565O15544 149 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 SLC16A8O95907 504 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 EPHX1P07099 455 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 C8GP07360 202 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 BCKDHAP12694 445 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 CYP2A7P20853 494 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 FSHRP23945 695 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 ENTPD1P49961 510 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 PFN3P60673 137 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 ZDHHC20Q5W0Z9 365 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 PHACTR4Q8IZ21 702 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 DDHD1Q8NEL9 900 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 SMARCD2Q92925 531 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 APOLD1Q96LR9 279 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 HPS4Q9NQG7 708 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 GULP1Q9UBP9 304 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 TMEM98Q9Y2Y6 226 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 RWDD3Q9Y3V2 267 aa12.08□□□□□ -0.48
RNF4-201ENST00000314289 PCYT1BQ9Y5K3 369 aaPredicted RBP12.08□□□□□ -0.48
RNF4-201ENST00000314289 GFYI3L273 518 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 PLOD2O00469 737 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 LZTS3O60299 673 aaPredicted RBP12.07□□□□□ -0.48
RNF4-201ENST00000314289 ZNF23P17027 643 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 CD22P20273 847 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 MAP4P27816 1152 aaKnown RBP12.07□□□□□ -0.48
RNF4-201ENST00000314289 SLC7A1P30825 629 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 ZNF557Q8N988 423 aaPredicted RBP12.07□□□□□ -0.48
RNF4-201ENST00000314289 THUMPD3Q9BV44 507 aaKnown RBP12.07□□□□□ -0.48
RNF4-201ENST00000314289 RPF2Q9H7B2 306 aaKnown RBP12.07□□□□□ -0.48
RNF4-201ENST00000314289 GON4LQ3T8J9 2241 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 PRR23AA6NEV1 266 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 IFRD1O00458 451 aaPredicted RBP12.07□□□□□ -0.48
RNF4-201ENST00000314289 H6PDO95479 791 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 KRT6AP02538 564 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 KRT6BP04259 564 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 TFPTP0C1Z6 253 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 C6P13671 934 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 IL12RB1P42701 662 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 KRT6CP48668 564 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 GBX1Q14549 363 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 PGS1Q32NB8 556 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 XKR6Q5GH73 641 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 BORAQ6PGQ7 559 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 CLVS1Q8IUQ0 354 aaPredicted RBP12.07□□□□□ -0.48
RNF4-201ENST00000314289 TMEM126BQ8IUX1 230 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 ERI1Q8IV48 349 aaKnown RBP12.07□□□□□ -0.48
RNF4-201ENST00000314289 UBTD2Q8WUN7 234 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 CHFRQ96EP1 664 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 RMND5BQ96G75 393 aaPredicted RBP12.07□□□□□ -0.48
RNF4-201ENST00000314289 C19orf43Q9BQ61 176 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 KXD1Q9BQD3 176 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 PLA2G2FQ9BZM2 168 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 MCOLN1Q9GZU1 580 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 MTIF3Q9H2K0 278 aaKnown RBP12.07□□□□□ -0.48
RNF4-201ENST00000314289 C1orf109Q9NX04 203 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.07□□□□□ -0.48
RNF4-201ENST00000314289 TRPS1Q9UHF7 1281 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 MYRFQ9Y2G1 1151 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms