RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 IGLV3-25P01717 112 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 HMGA1P17096 107 aaKnown RBP6.03□□□□□ -1.44
PRKDC-201ENST00000314191 KRT20P35900 424 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 MAPK12P53778 367 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 PDGFRLQ15198 375 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 GTDC1Q4AE62 458 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 FAM129CQ86XR2 697 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 DTNBP1Q96EV8 351 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 TRIT1Q9H3H1 467 aaKnown RBP6.03□□□□□ -1.44
PRKDC-201ENST00000314191 AMBNQ9NP70 447 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 VIPP01282 170 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 HNRNPA1P09651 372 aaKnown RBP eCLIP6.03□□□□□ -1.44
PRKDC-201ENST00000314191 IGFBP5P24593 272 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 ZNF140P52738 457 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-201ENST00000314191 USP39Q53GS9 565 aaKnown RBP6.03□□□□□ -1.44
PRKDC-201ENST00000314191 SH2D5Q6ZV89 423 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 ZFP28Q8NHY6 868 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 PHF10Q8WUB8 498 aaKnown RBP6.03□□□□□ -1.44
PRKDC-201ENST00000314191 ACADVLP49748 655 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 FOXM1Q08050 763 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 CNTN4Q8IWV2 1026 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 TRMT61BQ9BVS5 477 aaKnown RBP6.03□□□□□ -1.44
PRKDC-201ENST00000314191 SLC27A6Q9Y2P4 619 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 EDDM13A0A1B0GTR0 161 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 CLIC1O00299 241 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 TNFRSF11BO00300 401 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 TSPAN6O43657 245 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 POU2F1P14859 743 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 ERVFC1P60507 584 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 KCTD21Q4G0X4 260 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 MANEALQ5VSG8 457 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 WDR26Q9H7D7 661 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 PSME2Q9UL46 239 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 BUD31P41223 144 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-201ENST00000314191 RAB8AP61006 207 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 BLOC1S3Q6QNY0 202 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 LRRTM4Q86VH4 590 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 LHX3Q9UBR4 397 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 FZD4Q9ULV1 537 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 OARD1Q9Y530 152 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 HNMTP50135 292 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 FBXW4P57775 412 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 DPY19L1Q2PZI1 675 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 ZNF805Q5CZA5 627 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 MAVSQ7Z434 540 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 CMTM7Q96FZ5 175 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 TRPS1Q9UHF7 1281 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 TEKT2Q9UIF3 430 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 CORO2BQ9UQ03 480 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 DMTF1Q9Y222 760 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 FAM155AB1AL88 458 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-201ENST00000314191 HTRA2O43464 458 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-201ENST00000314191 ZNF655Q8N720 491 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-201ENST00000314191 BTN2A2Q8WVV5 523 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 SIPA1Q96FS4 1042 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 FBXL20Q96IG2 436 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 UBXN10Q96LJ8 280 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 CXorf21Q9HAI6 301 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 OGDHLQ9ULD0 1010 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 H3BSA7 217 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 CDH1P12830 882 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 TLX1P31314 330 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-201ENST00000314191 RPS13P62277 151 aaKnown RBP6.03□□□□□ -1.44
PRKDC-201ENST00000314191 SRSF11Q05519 484 aaKnown RBP6.03□□□□□ -1.44
PRKDC-201ENST00000314191 RFLNAQ6ZTI6 216 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 TRIM69Q86WT6 500 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 ISL2Q96A47 359 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 RETREG1Q9H6L5 497 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 FARSBQ9NSD9 589 aaKnown RBP6.03□□□□□ -1.44
PRKDC-201ENST00000314191 SOHLH2Q9NX45 425 aa6.03□□□□□ -1.44
PRKDC-201ENST00000314191 HNRNPCL2B2RXH8 293 aa6.02□□□□□ -1.44
PRKDC-201ENST00000314191 NME4O00746 187 aa6.02□□□□□ -1.44
PRKDC-201ENST00000314191 OR6B1O95007 311 aa6.02□□□□□ -1.44
PRKDC-201ENST00000314191 GALNT1Q10472 559 aaPredicted RBP6.02□□□□□ -1.44
PRKDC-201ENST00000314191 TRAF3Q13114 568 aa6.02□□□□□ -1.44
PRKDC-201ENST00000314191 LRRC32Q14392 662 aa6.02□□□□□ -1.44
PRKDC-201ENST00000314191 TRIM16LQ309B1 348 aa6.02□□□□□ -1.44
PRKDC-201ENST00000314191 NADK2Q4G0N4 442 aa6.02□□□□□ -1.44
PRKDC-201ENST00000314191 ZFAND4Q86XD8 727 aa6.02□□□□□ -1.44
PRKDC-201ENST00000314191 OTUB2Q96DC9 234 aa6.02□□□□□ -1.44
PRKDC-201ENST00000314191 ATOH8Q96SQ7 321 aa6.02□□□□□ -1.44
PRKDC-201ENST00000314191 DAPK2Q9UIK4 370 aa6.02□□□□□ -1.44
PRKDC-201ENST00000314191 FGF4P08620 206 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 ST13P50502 369 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 TRIM71Q2Q1W2 868 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 PRAMEF14Q5SWL7 426 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 PRAMEF13Q5VWM6 474 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 KRTCAP2Q8N6L1 136 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 ADAMTS15Q8TE58 950 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 NRG4Q8WWG1 115 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 YIPF4Q9BSR8 244 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 FANCEQ9HB96 536 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 PRSS51A0A1B0GVH4 220 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 TNFAIP8L2Q6P589 184 aaPredicted RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 ANKLE1Q8NAG6 615 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 LKAAEAR1Q8TD35 194 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 LMLNQ96KR4 655 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 TPT1P8Q9HAU6 139 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 RPS6KB2Q9UBS0 482 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 HEPACAM2A8MVW5 462 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms