RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 SUSD1Q6UWL2 747 aa13.51□□□□□ -0.25
MKS1-201ENST00000313863 CYP4Z1Q86W10 505 aa13.51□□□□□ -0.25
MKS1-201ENST00000313863 SERPINA9Q86WD7 417 aa13.51□□□□□ -0.25
MKS1-201ENST00000313863 ZNF280BQ86YH2 543 aa13.51□□□□□ -0.25
MKS1-201ENST00000313863 CHPFQ8IZ52 775 aa13.51□□□□□ -0.25
MKS1-201ENST00000313863 ZBTB2Q8N680 514 aa13.51□□□□□ -0.25
MKS1-201ENST00000313863 MCFD2Q8NI22 146 aa13.51□□□□□ -0.25
MKS1-201ENST00000313863 C2orf15Q8WU43 125 aaKnown RBP13.51□□□□□ -0.25
MKS1-201ENST00000313863 PLD4Q96BZ4 506 aa13.51□□□□□ -0.25
MKS1-201ENST00000313863 SEPT5Q99719 369 aaPredicted RBP13.51□□□□□ -0.25
MKS1-201ENST00000313863 CEP44Q9C0F1 390 aa13.51□□□□□ -0.25
MKS1-201ENST00000313863 DSN1Q9H410 356 aa13.51□□□□□ -0.25
MKS1-201ENST00000313863 KRT84Q9NSB2 600 aa13.51□□□□□ -0.25
MKS1-201ENST00000313863 ZNF229Q9UJW7 825 aa13.51□□□□□ -0.25
MKS1-201ENST00000313863 OSGIN1Q9UJX0 560 aa13.51□□□□□ -0.25
MKS1-201ENST00000313863 NDRG4Q9ULP0 352 aaKnown RBP13.51□□□□□ -0.25
MKS1-201ENST00000313863 SNX6Q9UNH7 406 aa13.51□□□□□ -0.25
MKS1-201ENST00000313863 AP1M2Q9Y6Q5 423 aa13.51□□□□□ -0.25
MKS1-201ENST00000313863 ZNF106Q9H2Y7 1883 aaKnown RBP13.5□□□□□ -0.25
MKS1-201ENST00000313863 SCN8AQ9UQD0 1980 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 UTRNP46939 3433 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 PLXNA4Q9HCM2 1894 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 TTC34A8MYJ7 566 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 MYO1GB0I1T2 1018 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 MITFO75030 526 aaPredicted RBP13.5□□□□□ -0.25
MKS1-201ENST00000313863 STK16O75716 305 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 PPP3CCP48454 512 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 DAPP51397 102 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 LSM3P62310 102 aaKnown RBP13.5□□□□□ -0.25
MKS1-201ENST00000313863 IL1RL1Q01638 556 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 TWF1Q12792 350 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 GTDC1Q4AE62 458 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 ZNF783Q6ZMS7 281 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 PAGE2Q7Z2X7 111 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 TTC9BQ8N6N2 239 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 NELL1Q92832 810 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 SLC38A4Q969I6 547 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 SERHLQ9NQF3 203 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 TSR3Q9UJK0 312 aaKnown RBP13.5□□□□□ -0.25
MKS1-201ENST00000313863 TSC22D4Q9Y3Q8 395 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 UGT2A1Q9Y4X1 527 aa13.5□□□□□ -0.25
MKS1-201ENST00000313863 EFCAB9A8MZ26 197 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 LOC730098B7Z3J9 87 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 ARVCFO00192 962 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 RFXANKO14593 260 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 DPM1O60762 260 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 SLC25A14O95258 325 aaPredicted RBP13.49□□□□□ -0.25
MKS1-201ENST00000313863 FADS2O95864 444 aaKnown RBP13.49□□□□□ -0.25
MKS1-201ENST00000313863 CBSLP0DN79 551 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 BMP1P13497 986 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 CD36P16671 472 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 PRPH2P23942 346 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 CD6P30203 668 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 CBSP35520 551 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 GJA8P48165 433 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 PCYT1AP49585 367 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 CLK1P49759 484 aaKnown RBP13.49□□□□□ -0.25
MKS1-201ENST00000313863 IFITM3Q01628 133 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 DGCR6Q14129 220 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 MRPL58Q14197 206 aaKnown RBP13.49□□□□□ -0.25
MKS1-201ENST00000313863 FAM26DQ5JW98 314 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 UBE2UQ5VVX9 321 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 TMEM236Q5W0B7 351 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 SLC22A16Q86VW1 577 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 TCAIMQ8N3R3 496 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 BEND7Q8N7W2 519 aaPredicted RBP13.49□□□□□ -0.25
MKS1-201ENST00000313863 KIAA1958Q8N8K9 716 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 NAT16Q8N8M0 369 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 CMTM7Q96FZ5 175 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 MAGEB10Q96LZ2 347 aaPredicted RBP13.49□□□□□ -0.25
MKS1-201ENST00000313863 SMIM14Q96QK8 99 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 PITX2Q99697 317 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 ITPAQ9BY32 194 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 SLIRPQ9GZT3 109 aaKnown RBP13.49□□□□□ -0.25
MKS1-201ENST00000313863 REEP1Q9H902 201 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 FARSBQ9NSD9 589 aaKnown RBP13.49□□□□□ -0.25
MKS1-201ENST00000313863 THG1LQ9NWX6 298 aaKnown RBP13.49□□□□□ -0.25
MKS1-201ENST00000313863 ATP11BQ9Y2G3 1177 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 PRG3Q9Y2Y8 225 aaPredicted RBP13.49□□□□□ -0.25
MKS1-201ENST00000313863 PMF1-BGLAPU3KQ54 211 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 PIKFYVEQ9Y2I7 2098 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 OR2A25A4D2G3 310 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 MTMR11A4FU01 709 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 CA12O43570 354 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 MAN1A2O60476 641 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 UPK1BO75841 260 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 ANXA5P08758 320 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 MYCLP1P12525 358 aaPredicted RBP13.49□□□□□ -0.25
MKS1-201ENST00000313863 CYP4B1P13584 511 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 HOXB9P17482 250 aaPredicted RBP13.49□□□□□ -0.25
MKS1-201ENST00000313863 MASP1P48740 699 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 ARPP19P56211 112 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 RPS24P62847 133 aaKnown RBP13.49□□□□□ -0.25
MKS1-201ENST00000313863 GPR17Q13304 367 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 DNASE1L3Q13609 305 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 INO80DQ53TQ3 878 aaPredicted RBP13.49□□□□□ -0.25
MKS1-201ENST00000313863 CARD16Q5EG05 197 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 RNF219Q5W0B1 726 aaPredicted RBP13.49□□□□□ -0.25
MKS1-201ENST00000313863 CCDC80Q76M96 950 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 TRIB2Q92519 343 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms