RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 A6NHS1 94 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 AXIN1O15169 862 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 LATO43561 262 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 ITM2AO43736 263 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 SMIM10L2AP0DMW4 78 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 SMIM10L2BP0DMW5 78 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 RHCEP18577 417 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 FOXN2P32314 431 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 CCR8P51685 355 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 STC1P52823 247 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 PPP5CP53041 499 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 EGFL6Q8IUX8 553 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 C1orf127Q8N9H9 656 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 ATAD1Q8NBU5 361 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 RAD51AP1Q96B01 352 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 KCNH6Q9H252 994 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 A0A1B0GVC2 190 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 ARPC2O15144 300 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 TLR5O60602 858 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 TIPRLO75663 272 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 RPL10P27635 214 aaKnown RBP8.63□□□□□ -1.03
COL6A5-202ENST00000312481 GMPRP36959 345 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 OMPP47874 163 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 MAP2K5Q13163 448 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 VEZF1Q14119 521 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 RCAN2Q14206 197 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 FAM171A1Q5VUB5 890 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 EGFLAMQ63HQ2 1017 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 CAPSLQ8WWF8 208 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 SEMA4DQ92854 862 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 BTRCQ9Y297 605 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 MAB21L2Q9Y586 359 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 CASP8AP2Q9UKL3 1982 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 IRF6O14896 467 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 MT-ND2P03891 347 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 LAG3P18627 525 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 ARSFP54793 590 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 ORC1Q13415 861 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 CBX2Q14781 532 aaPredicted RBP8.63□□□□□ -1.03
COL6A5-202ENST00000312481 SUZ12Q15022 739 aaKnown RBP8.63□□□□□ -1.03
COL6A5-202ENST00000312481 REEP3Q6NUK4 255 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 KCTD4Q8WVF5 259 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 HYLS1Q96M11 299 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 POTEKPQ9BYX7 375 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 CNOT2Q9NZN8 540 aaKnown RBP8.63□□□□□ -1.03
COL6A5-202ENST00000312481 RNF181Q9P0P0 153 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 OAS3Q9Y6K5 1087 aaKnown RBP8.63□□□□□ -1.03
COL6A5-202ENST00000312481 PI4KAP42356 2102 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 PRSS51A0A1B0GVH4 220 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 YDJCA8MPS7 323 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 TNFRSF21O75509 655 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 RNASEH2AO75792 299 aaKnown RBP8.63□□□□□ -1.03
COL6A5-202ENST00000312481 MC4RP32245 332 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 APLP1P51693 650 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 C15orf59Q2T9L4 293 aaPredicted RBP8.63□□□□□ -1.03
COL6A5-202ENST00000312481 CHMP1BQ7LBR1 199 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 NUDT13Q86X67 352 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 MS4A15Q8N5U1 240 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 SPO11Q9Y5K1 396 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 MDC1Q14676 2089 aaKnown RBP8.63□□□□□ -1.03
COL6A5-202ENST00000312481 CLDN4O14493 209 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 ADAM8P78325 824 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 MKRN4PQ13434 485 aaPredicted RBP8.63□□□□□ -1.03
COL6A5-202ENST00000312481 IL18Q14116 193 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 IKBKEQ14164 716 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 FAM174BQ3ZCQ3 159 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 FRG2Q64ET8 278 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 WSCD1Q658N2 575 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 PCDH20Q8N6Y1 951 aaKnown RBP8.63□□□□□ -1.03
COL6A5-202ENST00000312481 CCDC115Q96NT0 180 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 FRG2BQ96QU4 278 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 CCDC106Q9BWC9 280 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 TMEM248Q9NWD8 314 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 VPS29Q9UBQ0 182 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 ACSL5Q9ULC5 683 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 XKRYO14609 159 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 NME6O75414 186 aaPredicted RBP8.63□□□□□ -1.03
COL6A5-202ENST00000312481 VTNP04004 478 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 ITGAMP11215 1152 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 LAMP2P13473 410 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 GRM2Q14416 872 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 C15orf39Q6ZRI6 1047 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 TNFAIP8L1Q8WVP5 186 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 KAT2AQ92830 837 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 RAB7BQ96AH8 199 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 CLCC1Q96S66 551 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 LPIN3Q9BQK8 851 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 PHF24Q9UPV7 400 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 SVILO95425 2214 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 SBF1O95248 1867 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 FAM155AB1AL88 458 aaPredicted RBP8.63□□□□□ -1.03
COL6A5-202ENST00000312481 AOC2O75106 756 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 DPP6P42658 865 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 PCLAFQ15004 111 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 NPTX1Q15818 432 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 NADK2Q4G0N4 442 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 C3orf67Q6ZVT6 689 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 CCDC28AQ8IWP9 274 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 OR4C15Q8NGM1 316 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 ZNF558Q96NG5 402 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms