RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 CCDC106Q9BWC9 280 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 SGPP1Q9BX95 441 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 AKTIPQ9H8T0 292 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 RIC8BQ9NVN3 520 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 GPRC5BQ9NZH0 403 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 SCHIP1Q9P0W5 487 aaPredicted RBP21.85■■□□□ 1.09
IRF3-201ENST00000309877 DYRK1BQ9Y463 629 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 COLEC10Q9Y6Z7 277 aa21.85■■□□□ 1.09
IRF3-201ENST00000309877 CCDC163A0A0D9SF12 145 aa21.84■■□□□ 1.09
IRF3-201ENST00000309877 LAMTOR5O43504 91 aa21.84■■□□□ 1.09
IRF3-201ENST00000309877 MTHFD1P11586 935 aaKnown RBP21.84■■□□□ 1.09
IRF3-201ENST00000309877 CTSEP14091 401 aa21.84■■□□□ 1.09
IRF3-201ENST00000309877 CCND1P24385 295 aa21.84■■□□□ 1.09
IRF3-201ENST00000309877 CPSF6Q16630 551 aaKnown RBP eCLIP21.84■■□□□ 1.09
IRF3-201ENST00000309877 SPRED3Q2MJR0 410 aa21.84■■□□□ 1.09
IRF3-201ENST00000309877 GGTA1PQ4G0N0 100 aa21.84■■□□□ 1.09
IRF3-201ENST00000309877 XKR6Q5GH73 641 aa21.84■■□□□ 1.09
IRF3-201ENST00000309877 THEMIS2Q5TEJ8 643 aa21.84■■□□□ 1.09
IRF3-201ENST00000309877 TMEM198Q66K66 360 aa21.84■■□□□ 1.09
IRF3-201ENST00000309877 LARP4Q71RC2 724 aaKnown RBP eCLIP21.84■■□□□ 1.091e-6■■□□□ 13.6
IRF3-201ENST00000309877 LRRC56Q8IYG6 542 aaPredicted RBP21.84■■□□□ 1.09
IRF3-201ENST00000309877 RGL4Q8IZJ4 473 aa21.84■■□□□ 1.09
IRF3-201ENST00000309877 LMNTD1Q8N9Z9 388 aa21.84■■□□□ 1.09
IRF3-201ENST00000309877 L3MBTL4Q8NA19 623 aa21.84■■□□□ 1.09
IRF3-201ENST00000309877 CATSPER2Q96P56 530 aa21.84■■□□□ 1.09
IRF3-201ENST00000309877 GSDMCQ9BYG8 508 aa21.84■■□□□ 1.09
IRF3-201ENST00000309877 TXLNGQ9NUQ3 528 aa21.84■■□□□ 1.09
IRF3-201ENST00000309877 A0A1W2PR77 199 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 UBDO15205 165 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 UGDHO60701 494 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 ULK1O75385 1050 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 ATP5HO75947 161 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 KRT6AP02538 564 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 KRT6BP04259 564 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 GNAZP19086 355 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 KRT6CP48668 564 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 FNTBP49356 437 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 HTR6P50406 440 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 LIPJQ5W064 366 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 SUSD1Q6UWL2 747 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 NRROSQ86YC3 692 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 PHACTR4Q8IZ21 702 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 GPBAR1Q8TDU6 330 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 SETD7Q8WTS6 366 aaKnown RBP21.83■■□□□ 1.09
IRF3-201ENST00000309877 TCEAL2Q9H3H9 227 aaPredicted RBP21.83■■□□□ 1.09
IRF3-201ENST00000309877 TM9SF3Q9HD45 589 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 PCOLCE2Q9UKZ9 415 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 SNX6Q9UNH7 406 aa21.83■■□□□ 1.09
IRF3-201ENST00000309877 CAPN14A8MX76 684 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 PRR5-ARHGAP8B1AHC4 643 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 E7EQ34 232 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 MANBAO00462 879 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 KDM1AO60341 852 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 CBX6O95503 412 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 WNT1P04628 370 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 ERGP11308 486 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 CYP2A13Q16696 494 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 C2orf73Q8N5S3 287 aaPredicted RBP21.82■■□□□ 1.08
IRF3-201ENST00000309877 NSL1Q96IY1 281 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 RAB11FIP5Q9BXF6 653 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 DUSP15Q9H1R2 295 aaPredicted RBP21.82■■□□□ 1.08
IRF3-201ENST00000309877 ARL8BQ9NVJ2 186 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 KLF15Q9UIH9 416 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 SLC12A4Q9UP95 1085 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 CAPN7Q9Y6W3 813 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 TLR4O00206 839 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 EML2O95834 649 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 NPPBP16860 134 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 NDUFS1P28331 727 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 ABRAXAS2Q15018 415 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 SGO1Q5FBB7 561 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 XKR7Q5GH72 579 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 TJAP1Q5JTD0 557 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 WDR45BQ5MNZ6 344 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 LAYNQ6UX15 382 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 ARMCX6Q7L4S7 300 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 TREML1Q86YW5 311 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 SMPDL3AQ92484 453 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 SH3KBP1Q96B97 665 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 MARK4Q96L34 752 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 ELOVL6Q9H5J4 265 aa21.82■■□□□ 1.08
IRF3-201ENST00000309877 PRMT8Q9NR22 394 aaPredicted RBP21.82■■□□□ 1.08
IRF3-201ENST00000309877 ZNF490Q9ULM2 529 aaPredicted RBP21.82■■□□□ 1.08
IRF3-201ENST00000309877 KCNE1BA0A087WTH5 132 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 PRAMEF4O60810 478 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 WFS1O76024 890 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 F3P13726 295 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 JUPP14923 745 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 JUNDP17535 347 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 LBPP18428 481 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 DOC2AQ14183 400 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 ZRSR2Q15696 482 aaKnown RBP21.81■■□□□ 1.08
IRF3-201ENST00000309877 PRAMEF14Q5SWL7 426 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 PRAMEF9Q5VWM5 478 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 PRAMEF13Q5VWM6 474 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 CHSY3Q70JA7 882 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 LPCAT2Q7L5N7 544 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 TAF8Q7Z7C8 310 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 WDR5BQ86VZ2 330 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 CPSF7Q8N684 471 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms