RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 VPS37BQ9H9H4 285 aa11.28□□□□□ -0.6
SMIM4-201ENST00000307106 ZNF304Q9HCX3 659 aa11.28□□□□□ -0.6
SMIM4-201ENST00000307106 RIC8BQ9NVN3 520 aa11.28□□□□□ -0.6
SMIM4-201ENST00000307106 FKBPLQ9UIM3 349 aa11.28□□□□□ -0.6
SMIM4-201ENST00000307106 NPIPA1Q9UND3 350 aa11.28□□□□□ -0.6
SMIM4-201ENST00000307106 ASF1AQ9Y294 204 aa11.28□□□□□ -0.6
SMIM4-201ENST00000307106 TDRKHQ9Y2W6 561 aaKnown RBP11.28□□□□□ -0.6
SMIM4-201ENST00000307106 ARL5AQ9Y689 179 aa11.28□□□□□ -0.6
SMIM4-201ENST00000307106 A0A1W2PQ72 361 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 AGAP14A8MT82 685 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 ADAM10O14672 748 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 TTI1O43156 1089 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 TSPAN12O95859 305 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 TPBGLP0DKB5 382 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 NFKB1P19838 968 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 KDELR1P24390 212 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 PTPN3P26045 913 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 CD68P34810 354 aaPredicted RBP11.27□□□□□ -0.61
SMIM4-201ENST00000307106 TAS2R40P59535 323 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 OLIG2Q13516 323 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 FAM214AQ32MH5 1076 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 ZC3H12BQ5HYM0 836 aaKnown RBP11.27□□□□□ -0.61
SMIM4-201ENST00000307106 NPNTQ6UXI9 565 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 NEK10Q6ZWH5 1172 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 Q71RC1 249 aaPredicted RBP11.27□□□□□ -0.61
SMIM4-201ENST00000307106 LAPTM4BQ86VI4 370 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 DMRTC2Q8IXT2 367 aaPredicted RBP11.27□□□□□ -0.61
SMIM4-201ENST00000307106 TAB3Q8N5C8 712 aaPredicted RBP11.27□□□□□ -0.61
SMIM4-201ENST00000307106 IPMKQ8NFU5 416 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 OR4K2Q8NGD2 314 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.27□□□□□ -0.61
SMIM4-201ENST00000307106 HEXDCQ8WVB3 486 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 RAPGEF5Q92565 580 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 ULK4Q96C45 1275 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 OLFM3Q96PB7 478 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 COPS8Q99627 209 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 FAM96AQ9H5X1 160 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 STMN3Q9NZ72 180 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 AIPL1Q9NZN9 384 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 KCNN3Q9UGI6 736 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 POLG2Q9UHN1 485 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 PLAGL1Q9UM63 463 aa11.27□□□□□ -0.61
SMIM4-201ENST00000307106 LUC7L2Q9Y383 392 aaKnown RBP11.27□□□□□ -0.61
SMIM4-201ENST00000307106 PRRG2O14669 202 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 APOL1O14791 398 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 ZWINTO95229 277 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 SKILP12757 684 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 GRIA3P42263 894 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 EMP2P54851 167 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 AP2B1P63010 937 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 XIAPP98170 497 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 HSF1Q00613 529 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 MYBPHQ13203 477 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 DSG2Q14126 1118 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 PCOLCEQ15113 449 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 SKOR2Q2VWA4 1001 aaPredicted RBP11.26□□□□□ -0.61
SMIM4-201ENST00000307106 SLC9A4Q6AI14 798 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 BIVMQ86UB2 503 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 TBC1D21Q8IYX1 336 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 GHDCQ8N2G8 530 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 OR5K2Q8NHB8 316 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 SELENOSQ9BQE4 189 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 KLHL1Q9NR64 748 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.26□□□□□ -0.61
SMIM4-201ENST00000307106 TEKT2Q9UIF3 430 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 CSPG4Q6UVK1 2322 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 SCN3AQ9NY46 2000 aa11.26□□□□□ -0.61
SMIM4-201ENST00000307106 ARHGAP21Q5T5U3 1957 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 IGLV3-12A0A075B6K2 115 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 HYKKA2RU49 373 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 FITM1A5D6W6 292 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 NKX2-6A6NCS4 301 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 ASPDHA6ND91 283 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 LRRC10BA6NIK2 292 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 C2orf81A6NN90 581 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 FAM90A27PA6NNH2 459 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 IDSB3KWA1 339 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 BHMG1C9JSJ3 638 aaPredicted RBP11.25□□□□□ -0.61
SMIM4-201ENST00000307106 ASNA1O43681 348 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 MED26O95402 600 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 CYP1A2P05177 515 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 ITGALP20701 1170 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 ACADLP28330 430 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 MSX1P28360 303 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 EEF1DP29692 281 aaKnown RBP11.25□□□□□ -0.61
SMIM4-201ENST00000307106 ADAM8P78325 824 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 TFF3Q07654 80 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 TAF1AQ15573 450 aaPredicted RBP11.25□□□□□ -0.61
SMIM4-201ENST00000307106 PRMT9Q6P2P2 845 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 APTXQ7Z2E3 356 aaKnown RBP11.25□□□□□ -0.61
SMIM4-201ENST00000307106 AMER2Q8N7J2 671 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 OXNAD1Q96HP4 312 aaPredicted RBP11.25□□□□□ -0.61
SMIM4-201ENST00000307106 FRMD6Q96NE9 622 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 ZNF285Q96NJ3 590 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 SIGLEC12Q96PQ1 595 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 SMR3AQ99954 134 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 TRIM51Q9BSJ1 452 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 HES7Q9BYE0 225 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 NUP62CLQ9H1M0 184 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 ENAMQ9NRM1 1142 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms