RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 CAMKK1Q8N5S9 505 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 NELL1Q92832 810 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 HIST1H2AHQ96KK5 128 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 HIST1H2AJQ99878 128 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 RTP3Q9BQQ7 232 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 H2AFJQ9BTM1 129 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 CD320Q9NPF0 282 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 PCTPQ9UKL6 214 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 DUSP12Q9UNI6 340 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 TPRKBQ9Y3C4 175 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 PCDHB14Q9Y5E9 798 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 SLC35F4A4IF30 521 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 RGS10O43665 173 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 EPB42P16452 691 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 TACR2P21452 398 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 PRIM2P49643 509 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 INAVAQ3KP66 663 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 BRMS1LQ5PSV4 323 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 CEP68Q76N32 757 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 CLECL1Q8IZS7 167 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 NKAPQ8N5F7 415 aaKnown RBP14.23□□□□□ -0.13
PTPN9-201ENST00000306726 ISL2Q96A47 359 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 COPS4Q9BT78 406 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 SMOC2Q9H3U7 446 aa14.23□□□□□ -0.13
PTPN9-201ENST00000306726 H3BN98 237 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 RGS14O43566 566 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 CLDN7O95471 211 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 HSD17B1P14061 328 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 RHOQP17081 205 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 PTGER1P34995 402 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 HCAR3P49019 387 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 MBTPS1Q14703 1052 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 IER5LQ5T953 404 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 BORAQ6PGQ7 559 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 AKAP14Q86UN6 197 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 C10orf111Q8N326 155 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 BEND7Q8N7W2 519 aaPredicted RBP14.22□□□□□ -0.13
PTPN9-201ENST00000306726 ZNF487B1APH4 448 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 GABRDO14764 452 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 INSIG1O15503 277 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 SOX14O95416 240 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 GJA1P17302 382 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 FDXRP22570 491 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 FEN1P39748 380 aaKnown RBP14.22□□□□□ -0.13
PTPN9-201ENST00000306726 RPL26P61254 145 aaKnown RBP14.22□□□□□ -0.13
PTPN9-201ENST00000306726 UPP1Q16831 310 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 ANKS3Q6ZW76 656 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 DBF4BQ8NFT6 615 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 ZNF599Q96NL3 588 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 RBM4BQ9BQ04 359 aaKnown RBP14.22□□□□□ -0.13
PTPN9-201ENST00000306726 ACBD6Q9BR61 282 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 RBM4Q9BWF3 364 aaKnown RBP14.22□□□□□ -0.13
PTPN9-201ENST00000306726 USE1Q9NZ43 259 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 DNAJB9Q9UBS3 223 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 SLCO3A1Q9UIG8 710 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 PCDHB5Q9Y5E4 795 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 HHLA1C9JL84 531 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 IFRD1O00458 451 aaPredicted RBP14.22□□□□□ -0.13
PTPN9-201ENST00000306726 ALPLP05186 524 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 NUDT7P0C024 238 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 CKMT1AP12532 417 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 SDHBP21912 280 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 DCTP40126 519 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 ALDH9A1P49189 494 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 CDH12P55289 794 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 SCAPQ12770 1279 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 ARMC4Q5T2S8 1044 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 KANK2Q63ZY3 851 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 PROSER1Q86XN7 944 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 ZNF366Q8N895 744 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 LGALS12Q96DT0 336 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 PADI4Q9UM07 663 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 DLGAP4Q9Y2H0 992 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 CEP290O15078 2479 aa14.22□□□□□ -0.13
PTPN9-201ENST00000306726 RCAN2Q14206 197 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 SKIV2LQ15477 1246 aaKnown RBP14.21□□□□□ -0.13
PTPN9-201ENST00000306726 KLHL17Q6TDP4 642 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 SPATA19Q7Z5L4 167 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 TMEM126BQ8IUX1 230 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 CCDC117Q8IWD4 279 aaPredicted RBP14.21□□□□□ -0.13
PTPN9-201ENST00000306726 DEPDC4Q8N2C3 294 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 ARRDC2Q8TBH0 407 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 TTYH2Q9BSA4 534 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 TMEM121BQ9BXQ6 578 aaPredicted RBP14.21□□□□□ -0.13
PTPN9-201ENST00000306726 NTN4Q9HB63 628 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 TIGARQ9NQ88 270 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 COQ3Q9NZJ6 369 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 CNOT11Q9UKZ1 510 aaKnown RBP14.21□□□□□ -0.13
PTPN9-201ENST00000306726 PCDHGA4Q9Y5G9 962 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 PAPSS2O95340 614 aaPredicted RBP14.21□□□□□ -0.13
PTPN9-201ENST00000306726 FHP07954 510 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 HLA-DPA1P20036 260 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 CDKN2CP42773 168 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 STARD3Q14849 445 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 RNASE12Q5GAN4 147 aaKnown RBP14.21□□□□□ -0.13
PTPN9-201ENST00000306726 AFTPHQ6ULP2 937 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 GPR65Q8IYL9 337 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 OR4K1Q8NGD4 311 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 OR13F1Q8NGS4 319 aa14.21□□□□□ -0.13
PTPN9-201ENST00000306726 TOP1MTQ969P6 601 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms