RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 TREML1Q86YW5 311 aa17■□□□□ 0.31
KRT28-201ENST00000306658 RGL4Q8IZJ4 473 aa17■□□□□ 0.31
KRT28-201ENST00000306658 DEFB119Q8N690 84 aa17■□□□□ 0.31
KRT28-201ENST00000306658 MFSD2AQ8NA29 543 aa17■□□□□ 0.31
KRT28-201ENST00000306658 SLC6A18Q96N87 628 aa17■□□□□ 0.31
KRT28-201ENST00000306658 CATSPER2Q96P56 530 aa17■□□□□ 0.31
KRT28-201ENST00000306658 DLGAP2Q9P1A6 1054 aa17■□□□□ 0.31
KRT28-201ENST00000306658 PCOLCE2Q9UKZ9 415 aa17■□□□□ 0.31
KRT28-201ENST00000306658 G3BP2Q9UN86 482 aaKnown RBP17■□□□□ 0.31
KRT28-201ENST00000306658 COLEC10Q9Y6Z7 277 aa17■□□□□ 0.31
KRT28-201ENST00000306658 PLXND1Q9Y4D7 1925 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 ANKRD65E5RJM6 399 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 FFAR3O14843 346 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 GPR42O15529 346 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 WFS1O76024 890 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 HOXA6P31267 233 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 ACTR1BP42025 376 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 BLKP51451 505 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 ACTR1AP61163 376 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 RACK1P63244 317 aaKnown RBP16.99■□□□□ 0.31
KRT28-201ENST00000306658 TSTA3Q13630 321 aaPredicted RBP16.99■□□□□ 0.31
KRT28-201ENST00000306658 RPE65Q16518 533 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 CPSF6Q16630 551 aaKnown RBP eCLIP16.99■□□□□ 0.31
KRT28-201ENST00000306658 XKR6Q5GH73 641 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 TCHHL1Q5QJ38 904 aaPredicted RBP16.99■□□□□ 0.31
KRT28-201ENST00000306658 IQCHQ86VS3 1027 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 LRRC56Q8IYG6 542 aaPredicted RBP16.99■□□□□ 0.31
KRT28-201ENST00000306658 EDAQ92838 391 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 CMTM5Q96DZ9 223 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 OR4K3Q96R72 315 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 SPATA6Q9NWH7 488 aaPredicted RBP16.99■□□□□ 0.31
KRT28-201ENST00000306658 TBC1D29Q9UFV1 150 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 TAGLN3Q9UI15 199 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 PNMA8BQ9ULN7 279 aaPredicted RBP16.99■□□□□ 0.31
KRT28-201ENST00000306658 PLAGL1Q9UM63 463 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 DYRK1BQ9Y463 629 aa16.99■□□□□ 0.31
KRT28-201ENST00000306658 CCDC163A0A0D9SF12 145 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 MANBAO00462 879 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 ERGP11308 486 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 MTHFD1P11586 935 aaKnown RBP16.98■□□□□ 0.31
KRT28-201ENST00000306658 JUPP14923 745 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 NPPBP16860 134 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 AK4P27144 223 aaPredicted RBP16.98■□□□□ 0.31
KRT28-201ENST00000306658 NDUFS1P28331 727 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 CD38P28907 300 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 HNF4AP41235 474 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 IRX1P78414 480 aaPredicted RBP16.98■□□□□ 0.31
KRT28-201ENST00000306658 KLF10Q13118 480 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 FZD2Q14332 565 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 ABRAXAS2Q15018 415 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 CYP2A13Q16696 494 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 THEMIS2Q5TEJ8 643 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 CWF19L1Q69YN2 538 aaKnown RBP16.98■□□□□ 0.31
KRT28-201ENST00000306658 DUS1LQ6P1R4 473 aaKnown RBP16.98■□□□□ 0.31
KRT28-201ENST00000306658 SCIMPQ6UWF3 145 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 LPCAT2Q7L5N7 544 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 PARGQ86W56 976 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 PTCD3Q96EY7 689 aaKnown RBP16.98■□□□□ 0.31
KRT28-201ENST00000306658 CAMK1GQ96NX5 476 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 HAUS8Q9BT25 410 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 RAB11FIP5Q9BXF6 653 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 ELOVL6Q9H5J4 265 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 ZNF385DQ9H6B1 395 aa16.98■□□□□ 0.31
KRT28-201ENST00000306658 ZNF490Q9ULM2 529 aaPredicted RBP16.98■□□□□ 0.31
KRT28-201ENST00000306658 OR52A4PA6NMU1 304 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 E7EQ34 232 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 SLC28A1O00337 649 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 RGS14O43566 566 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 PEX11AO75192 247 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 CASP2P42575 452 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 HTR6P50406 440 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 MNAT1P51948 309 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 NCALDP61601 193 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 EIF2B5Q13144 721 aaKnown RBP16.97■□□□□ 0.31
KRT28-201ENST00000306658 FASTKQ14296 549 aaKnown RBP16.97■□□□□ 0.31
KRT28-201ENST00000306658 ATP6AP1LQ52LC2 224 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 OGFOD2Q6N063 350 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 SLC30A9Q6PML9 568 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 SUSD1Q6UWL2 747 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 SPATA19Q7Z5L4 167 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 CCL4L1Q8NHW4 92 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 USP7Q93009 1102 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 HSPA12BQ96MM6 686 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 IL17FQ96PD4 163 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 GSDMCQ9BYG8 508 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 PCBD2Q9H0N5 130 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 RRP15Q9Y3B9 282 aaKnown RBP16.97■□□□□ 0.31
KRT28-201ENST00000306658 COPG1Q9Y678 874 aaKnown RBP16.97■□□□□ 0.31
KRT28-201ENST00000306658 KCNE1BA0A087WTH5 132 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 PDGFBP01127 241 aaPredicted RBP16.97■□□□□ 0.31
KRT28-201ENST00000306658 PRR35P0CG20 571 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 PRDX6P30041 224 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 ATP4BP51164 291 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 STX1BP61266 288 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 ZNF33BQ06732 778 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 ACTN3Q08043 901 aaPredicted RBP16.97■□□□□ 0.31
KRT28-201ENST00000306658 DOC2AQ14183 400 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 SQLEQ14534 574 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 ZRSR2Q15696 482 aaKnown RBP16.97■□□□□ 0.31
KRT28-201ENST00000306658 GLIPR1L2Q4G1C9 344 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms