RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CHCHD6Q9BRQ6 235 aa15.58■□□□□ 0.09
USP42-201ENST00000306177 ZCCHC3Q9NUD5 404 aaKnown RBP15.58■□□□□ 0.09
USP42-201ENST00000306177 ATXN10Q9UBB4 475 aa15.58■□□□□ 0.09
USP42-201ENST00000306177 TMED5Q9Y3A6 229 aa15.58■□□□□ 0.09
USP42-201ENST00000306177 C5P01031 1676 aa15.58■□□□□ 0.09
USP42-201ENST00000306177 LCHNA4D1U4 455 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 TMEM233B4DJY2 109 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 ANXA8P13928 327 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 UPP1Q16831 310 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 EPGNQ6UW88 154 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 ATCAYQ86WG3 371 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 OR4C6Q8NH72 309 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 GORASP1Q9BQQ3 440 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 SPATA7Q9P0W8 599 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 TELO2Q9Y4R8 837 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 KCTD3Q9Y597 815 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 DPPA5A6NC42 116 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 TPST2O60704 377 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 CCT3P49368 545 aaKnown RBP15.58■□□□□ 0.08
USP42-201ENST00000306177 FOXM1Q08050 763 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 PRR23BQ6ZRT6 265 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 GPR151Q8TDV0 419 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 KAT2AQ92830 837 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 FIZ1Q96SL8 496 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 FLRT1Q9NZU1 646 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 DHRS7Q9Y394 339 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 CRYBG1Q9Y4K1 1723 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 AHDC1Q5TGY3 1603 aaPredicted RBP15.58■□□□□ 0.08
USP42-201ENST00000306177 TEX28O15482 410 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 CSNK2A2P19784 350 aaPredicted RBP15.58■□□□□ 0.08
USP42-201ENST00000306177 PIK3CBP42338 1070 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 KCTD8Q6ZWB6 473 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 CDH24Q86UP0 819 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 ZNF433Q8N7K0 673 aaPredicted RBP15.58■□□□□ 0.08
USP42-201ENST00000306177 C2CD4AQ8NCU7 369 aaPredicted RBP15.58■□□□□ 0.08
USP42-201ENST00000306177 KIAA1191Q96A73 305 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 NARS2Q96I59 477 aaKnown RBP15.58■□□□□ 0.08
USP42-201ENST00000306177 FEM1AQ9BSK4 669 aa15.58■□□□□ 0.08
USP42-201ENST00000306177 CLIC1O00299 241 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 ARPC2O15144 300 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 EPOP01588 193 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 IL18R1Q13478 541 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 GOLGA7Q7Z5G4 137 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 TRPV3Q8NET8 790 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 OR4F6Q8NGB9 312 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 TSEN15Q8WW01 171 aaKnown RBP15.57■□□□□ 0.08
USP42-201ENST00000306177 CMTM7Q96FZ5 175 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 DIRAS2Q96HU8 199 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 TLR9Q9NR96 1032 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 ING3Q9NXR8 418 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 PRKAB1Q9Y478 270 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 C10orf71Q711Q0 1435 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 ALPPL2P10696 532 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 TYRP14679 529 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 GATMP50440 423 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 TARDBPQ13148 414 aaKnown RBP eCLIP15.57■□□□□ 0.084e-6■■□□□ 11.5
USP42-201ENST00000306177 LCN1P1Q5VSP4 162 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 THOC6Q86W42 341 aaKnown RBP15.57■□□□□ 0.08
USP42-201ENST00000306177 FBXO15Q8NCQ5 510 aaPredicted RBP15.57■□□□□ 0.08
USP42-201ENST00000306177 BPIFB1Q8TDL5 484 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 CAMK1GQ96NX5 476 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 SLC35A5Q9BS91 424 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 TRMT61BQ9BVS5 477 aaKnown RBP15.57■□□□□ 0.08
USP42-201ENST00000306177 ADAMTS10Q9H324 1103 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 NLE1Q9NVX2 485 aaPredicted RBP15.57■□□□□ 0.08
USP42-201ENST00000306177 FZD4Q9ULV1 537 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 EI24O14681 340 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 GHRHRQ02643 423 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 TMEM44Q2T9K0 475 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 ABHD13Q7L211 337 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 ZNF280BQ86YH2 543 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 C1orf52Q8N6N3 182 aaKnown RBP15.57■□□□□ 0.08
USP42-201ENST00000306177 TOP1MTQ969P6 601 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 SIPA1Q96FS4 1042 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 TRNT1Q96Q11 434 aaKnown RBP15.57■□□□□ 0.08
USP42-201ENST00000306177 ANKHQ9HCJ1 492 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 CD320Q9NPF0 282 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 WNT6Q9Y6F9 365 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 SAGE2PA6NJ88 616 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 LDOC1O95751 146 aaPredicted RBP15.57■□□□□ 0.08
USP42-201ENST00000306177 DHFRP00374 187 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 PFKMP08237 780 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 GRK6P43250 576 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 SOX4Q06945 474 aaPredicted RBP15.57■□□□□ 0.08
USP42-201ENST00000306177 DAG1Q14118 895 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 C1orf220Q5T0J3 134 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 LDLRAD1Q5T700 205 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 SLC30A6Q6NXT4 461 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 PLET1Q6UQ28 207 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 FRRS1Q6ZNA5 592 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 BTN2A1Q7KYR7 527 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 NRSN1Q8IZ57 195 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 PPM1HQ9ULR3 514 aa15.57■□□□□ 0.08
USP42-201ENST00000306177 AOC1P19801 751 aa15.56■□□□□ 0.08
USP42-201ENST00000306177 RAB25P57735 213 aa15.56■□□□□ 0.08
USP42-201ENST00000306177 DSTNP60981 165 aa15.56■□□□□ 0.08
USP42-201ENST00000306177 USP30Q70CQ3 517 aa15.56■□□□□ 0.08
USP42-201ENST00000306177 SIX5Q8N196 739 aa15.56■□□□□ 0.08
USP42-201ENST00000306177 ATP6V1C2Q8NEY4 427 aa15.56■□□□□ 0.08
USP42-201ENST00000306177 SMPDL3AQ92484 453 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms