RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ZNF181Q2M3W8 571 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 PGS1Q32NB8 556 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 SOWAHCQ53LP3 525 aaPredicted RBP5.31□□□□□ -1.56
VPS50-202ENST00000305866 GNASQ5JWF2 1037 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 MRNIPQ6NTE8 343 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 PSAPL1Q6NUJ1 521 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 SLC24A5Q71RS6 500 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 SYNPOQ8N3V7 929 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 PARP16Q8N5Y8 322 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 IPMKQ8NFU5 416 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 OSCP1Q8WVF1 389 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 THAP11Q96EK4 314 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 CDKN2AIPNLQ96HQ2 116 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 HRASLS5Q96KN8 279 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 ZNF649Q9BS31 505 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 IL1RL2Q9HB29 575 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 SLC25A19Q9HC21 320 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 ZFP14Q9HCL3 533 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 TMEM161AQ9NX61 479 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 LEF1Q9UJU2 399 aaPredicted RBP5.31□□□□□ -1.56
VPS50-202ENST00000305866 N6AMT1Q9Y5N5 214 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 G3V2T6 193 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 M0QZ92 97 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 KPNA4O00629 521 aaPredicted RBP5.31□□□□□ -1.56
VPS50-202ENST00000305866 SEC24DO94855 1032 aaPredicted RBP5.31□□□□□ -1.56
VPS50-202ENST00000305866 ABLIM3O94929 683 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 FKBP9O95302 570 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 CXCL10P02778 98 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 LCKP06239 509 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 PIK3CBP42338 1070 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 RAD23AP54725 363 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 VLDLRP98155 873 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 OCA2Q04671 838 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 YWHAHQ04917 246 aaPredicted RBP5.31□□□□□ -1.56
VPS50-202ENST00000305866 SLC13A2Q13183 592 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 TSNQ15631 228 aaKnown RBP5.31□□□□□ -1.56
VPS50-202ENST00000305866 TTLL9Q3SXZ7 439 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 FBXO48Q5FWF7 155 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 PRAMEF19Q5SWL8 479 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 LYPLAL1Q5VWZ2 237 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 CYP20A1Q6UW02 462 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 MACC1Q6ZN28 852 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 GLRX5Q86SX6 157 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 SPATA2LQ8IUW3 424 aaPredicted RBP5.31□□□□□ -1.56
VPS50-202ENST00000305866 ZZZ3Q8IYH5 903 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 PDZD8Q8NEN9 1154 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 ANKK1Q8NFD2 765 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 OR4M2Q8NGB6 313 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 OR4L1Q8NH43 312 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 OR5K1Q8NHB7 308 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 LILRB4Q8NHJ6 448 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 PPP1R13LQ8WUF5 828 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 ASB15Q8WXK1 588 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 IL1RAPQ9NPH3 570 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 ASAH2Q9NR71 780 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 FARSBQ9NSD9 589 aaKnown RBP5.31□□□□□ -1.56
VPS50-202ENST00000305866 GID8Q9NWU2 228 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 MPP6Q9NZW5 540 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 LHX3Q9UBR4 397 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 AURKCQ9UQB9 309 aa5.31□□□□□ -1.56
VPS50-202ENST00000305866 A8MVJ9 347 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 HAT1O14929 419 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 OR1I1O60431 355 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 TPST1O60507 370 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 KCNK5O95279 499 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 ESR1P03372 595 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 ABCB1P08183 1280 aaPredicted RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 CBSLP0DN79 551 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 DDX5P17844 614 aaKnown RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 CBSP35520 551 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 PTGER3P43115 390 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 CREMQ03060 361 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 PFKFB4Q16877 469 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 IMPG1Q17R60 797 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 PRSS53Q2L4Q9 553 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.3□□□□□ -1.56
VPS50-202ENST00000305866 ATG9BQ674R7 924 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 DESI1Q6ICB0 168 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 CXorf57Q6NSI4 855 aaKnown RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 PNCKQ6P2M8 343 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 SPATC1Q76KD6 591 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 CAMKMTQ7Z624 323 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 ARMC8Q8IUR7 673 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.3□□□□□ -1.56
VPS50-202ENST00000305866 PSMG2Q969U7 264 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 LGALS12Q96DT0 336 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 SCYL1Q96KG9 808 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 NODALQ96S42 347 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 KLF16Q9BXK1 252 aaPredicted RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 TM9SF3Q9HD45 589 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 CATSPERZQ9NTU4 200 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 ATAD3AQ9NVI7 634 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 TRPS1Q9UHF7 1281 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 FAF1Q9UNN5 650 aaPredicted RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 CAB39Q9Y376 341 aaPredicted RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 DHRS7Q9Y394 339 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 TSC22D4Q9Y3Q8 395 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 OARD1Q9Y530 152 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 PCDHB5Q9Y5E4 795 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 PCDHB1Q9Y5F3 818 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms