RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 FBXL8Q96CD0 374 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 THAP11Q96EK4 314 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 RBM18Q96H35 190 aaKnown RBP8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 NDC1Q9BTX1 674 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 HEBP1Q9NRV9 189 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 TAC3Q9UHF0 121 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 SPO11Q9Y5K1 396 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 OAS3Q9Y6K5 1087 aaKnown RBP8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 RFXAPO00287 272 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 MANBAO00462 879 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 UMPSP11172 480 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 BDKRB1P46663 353 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 IDH3AP50213 366 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 GRIK2Q13002 908 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 SLC5A9Q2M3M2 681 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 TMEM35AQ53FP2 167 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 ACSBG2Q5FVE4 666 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 LYSMD4Q5XG99 296 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 PIM3Q86V86 326 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 TMC8Q8IU68 726 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 KIAA2013Q8IYS2 634 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 CAMKK1Q8N5S9 505 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 RCN3Q96D15 328 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 TEFMQ96QE5 360 aaKnown RBP8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 C17orf62Q9BQA9 187 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 POLR1BQ9H9Y6 1135 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 PRSS16Q9NQE7 514 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 COPS7AQ9UBW8 275 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 CCL26Q9Y258 94 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 ATXN1LP0C7T5 689 aaKnown RBP8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 MPIP34949 423 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 RAB28P51157 221 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 ARSDP51689 593 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 RFX4Q33E94 735 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 PRRT3Q5FWE3 981 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 PNCKQ6P2M8 343 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 PIH1D2Q8WWB5 315 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 PDLIM5Q96HC4 596 aaKnown RBP8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 VPS35Q96QK1 796 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 KLHL4Q9C0H6 718 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 PCED1AQ9H1Q7 454 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 PELI2Q9HAT8 420 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 RC3H2Q9HBD1 1191 aaKnown RBP8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 C19orf25Q9UFG5 118 aaPredicted RBP8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 SLC22A14Q9Y267 594 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 SIT1Q9Y3P8 196 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 PSAT1Q9Y617 370 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 BRCA1P38398 1863 aaKnown RBP8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 ANKRD65E5RJM6 399 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 NUAK1O60285 661 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 SCELO95171 688 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 C1GALT1C1LP0DN25 315 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 CSNK2A2P19784 350 aaPredicted RBP8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 ATP6V1B2P21281 511 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 IL12RB1P42701 662 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 TAS2R50P59544 299 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 RPS15AP62244 130 aaKnown RBP8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 CDKL1Q00532 357 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 NFATC4Q14934 902 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 GCNT6Q5T4J0 391 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 CAPRIN2Q6IMN6 1127 aaKnown RBP8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 ADAMTSL4Q6UY14 1074 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 PRR23CQ6ZRP0 262 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 ZBTB49Q6ZSB9 765 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 PLXDC1Q8IUK5 500 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 SIX5Q8N196 739 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 OR2T12Q8NG77 320 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 METTL2AQ96IZ6 378 aaKnown RBP8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 WDR55Q9H6Y2 383 aaPredicted RBP8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 MMP17Q9ULZ9 603 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 ZNFX1Q9P2E3 1918 aaKnown RBP8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 A0A0G2JMZ2 1700 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 AP3D1O14617 1153 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 SLC35E2BP0CK96 405 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 CD9P21926 228 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 ECHS1P30084 290 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 PBX2P40425 430 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 KHKP50053 298 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 PRKAG1P54619 331 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 EMX2Q04743 252 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 HYAL1Q12794 435 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 CLEC6AQ6EIG7 209 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 CD300LGQ6UXG3 332 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 TSPAN33Q86UF1 283 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 PARGQ86W56 976 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 LIX1Q8N485 282 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 ATG16L2Q8NAA4 619 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 TMEM145Q8NBT3 493 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 C11orf65Q8NCR3 313 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 PIGKQ92643 395 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 MOAP1Q96BY2 351 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 LYSMD1Q96S90 227 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 GTPBP2Q9BX10 602 aaKnown RBP8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 LRMDAQ9H2I8 198 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 NEUROD4Q9HD90 331 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 NME7Q9Y5B8 376 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 HS3ST3A1Q9Y663 406 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 MROH6A6NGR9 719 aa8.08□□□□□ -1.12
SNRPD1-201ENST00000300413 B4GALT3O60512 393 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms