RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 SAMD11Q96NU1 681 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 TOR3AQ9H497 397 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 LRTM1Q9HBL6 345 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 SH3BP4Q9P0V3 963 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 EIF3LQ9Y262 564 aaKnown RBP13.18□□□□□ -0.3
TTC39B-201ENST00000297615 TCRBV5S2A0A599 114 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 TOR1BO14657 336 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 STX16O14662 325 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 OTCP00480 354 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 ADH1AP07327 375 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 CTSLP07711 333 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 ANXA6P08133 673 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 CEBPBP17676 345 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 POLR2EP19388 210 aaKnown RBP13.18□□□□□ -0.3
TTC39B-201ENST00000297615 AP1S1P61966 158 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 PHC1P78364 1004 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 SLC14A1Q13336 389 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 ATP1A4Q13733 1029 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 SYTL3Q4VX76 610 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 CARD16Q5EG05 197 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 TRMT11Q7Z4G4 463 aaKnown RBP13.18□□□□□ -0.3
TTC39B-201ENST00000297615 NECAB2Q7Z6G3 386 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 GALNT7Q86SF2 657 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 TMC8Q8IU68 726 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 IRF7Q92985 503 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 MAL2Q969L2 176 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 ZNF382Q96SR6 550 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 UHRF1Q96T88 793 aaPredicted RBP13.18□□□□□ -0.3
TTC39B-201ENST00000297615 SORBS1Q9BX66 1292 aaKnown RBP13.18□□□□□ -0.3
TTC39B-201ENST00000297615 NPLQ9BXD5 320 aaPredicted RBP13.18□□□□□ -0.3
TTC39B-201ENST00000297615 ACPTQ9BZG2 426 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 CD244Q9BZW8 370 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 FAM83DQ9H4H8 585 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 POPDC3Q9HBV1 291 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 VPS9D1Q9Y2B5 631 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 ZNF451Q9Y4E5 1061 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 G3V2T6 193 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 MITFO75030 526 aaPredicted RBP13.17□□□□□ -0.3
TTC39B-201ENST00000297615 XYLBO75191 536 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 NME6O75414 186 aaPredicted RBP13.17□□□□□ -0.3
TTC39B-201ENST00000297615 PENKP01210 267 aaPredicted RBP13.17□□□□□ -0.3
TTC39B-201ENST00000297615 OPN1SWP03999 348 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 HNRNPCP07910 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
TTC39B-201ENST00000297615 ANXA5P08758 320 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 ARSFP54793 590 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 IRF8Q02556 426 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 TMEM220Q6QAJ8 160 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 Q6ZNB5 142 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 SZRD1Q7Z422 152 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 PLD3Q8IV08 490 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 NXPE3Q969Y0 559 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 MACROD1Q9BQ69 325 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 SEZ6LQ9BYH1 1024 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 OR2AG1Q9H205 316 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 EPB41L1Q9H4G0 881 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 TRBV23OR9-2A0A075B6M9 112 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 A0A0J9YVX5 310 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 FADS2P1A8MWK0 482 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 NOL3O60936 208 aaKnown RBP13.17□□□□□ -0.3
TTC39B-201ENST00000297615 DEAF1O75398 565 aaPredicted RBP13.17□□□□□ -0.3
TTC39B-201ENST00000297615 BCKDHAP12694 445 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 EN2P19622 333 aaPredicted RBP13.17□□□□□ -0.3
TTC39B-201ENST00000297615 MSH3P20585 1137 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 MYF6P23409 242 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 PIGAP37287 484 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 EMX2Q04743 252 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 DGCR6Q14129 220 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 ARHGEF6Q15052 776 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 OGFOD2Q6N063 350 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 KLHL35Q6PF15 583 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 TPRG1Q6ZUI0 275 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 ZC3H7AQ8IWR0 971 aaKnown RBP13.17□□□□□ -0.3
TTC39B-201ENST00000297615 STK40Q8N2I9 435 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 ZNF740Q8NDX6 193 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 OSCP1Q8WVF1 389 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 JPH3Q8WXH2 748 aaPredicted RBP13.17□□□□□ -0.3
TTC39B-201ENST00000297615 SCRN2Q96FV2 425 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 OTUB1Q96FW1 271 aaPredicted RBP13.17□□□□□ -0.3
TTC39B-201ENST00000297615 TPD52L3Q96J77 140 aa13.17□□□□□ -0.3
TTC39B-201ENST00000297615 ASCC3Q8N3C0 2202 aaKnown RBP13.17□□□□□ -0.3
TTC39B-201ENST00000297615 XPNPEP2O43895 674 aa13.16□□□□□ -0.3
TTC39B-201ENST00000297615 SERPINA1P01009 418 aa13.16□□□□□ -0.3
TTC39B-201ENST00000297615 PGRP06401 933 aa13.16□□□□□ -0.3
TTC39B-201ENST00000297615 FSHRP23945 695 aa13.16□□□□□ -0.3
TTC39B-201ENST00000297615 GNPDA1P46926 289 aa13.16□□□□□ -0.3
TTC39B-201ENST00000297615 CYP4F3Q08477 520 aa13.16□□□□□ -0.3
TTC39B-201ENST00000297615 ADRM1Q16186 407 aa13.16□□□□□ -0.3
TTC39B-201ENST00000297615 C5orf22Q49AR2 442 aa13.16□□□□□ -0.3
TTC39B-201ENST00000297615 TMEM31Q5JXX7 168 aa13.16□□□□□ -0.3
TTC39B-201ENST00000297615 INTS11Q5TA45 600 aaKnown RBP13.16□□□□□ -0.3
TTC39B-201ENST00000297615 ALG1LQ6GMV1 187 aa13.16□□□□□ -0.3
TTC39B-201ENST00000297615 GDPD4Q6W3E5 623 aa13.16□□□□□ -0.3
TTC39B-201ENST00000297615 MMAAQ8IVH4 418 aaKnown RBP13.16□□□□□ -0.3
TTC39B-201ENST00000297615 OR4K1Q8NGD4 311 aa13.16□□□□□ -0.3
TTC39B-201ENST00000297615 FIBINQ8TAL6 211 aa13.16□□□□□ -0.3
TTC39B-201ENST00000297615 FAM120BQ96EK7 910 aaKnown RBP13.16□□□□□ -0.3
TTC39B-201ENST00000297615 SLC47A1Q96FL8 570 aa13.16□□□□□ -0.3
TTC39B-201ENST00000297615 ZNF583Q96ND8 569 aa13.16□□□□□ -0.3
TTC39B-201ENST00000297615 NTN4Q9HB63 628 aa13.16□□□□□ -0.3
TTC39B-201ENST00000297615 TM7SF3Q9NS93 570 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms