RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 SLC6A2P23975 617 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 AVPR2P30518 371 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 PRLHRP49683 370 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 EEFSECP57772 596 aaKnown RBP16.37■□□□□ 0.21
CPSF4-201ENST00000292476 KCNK10P57789 538 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 STARD6P59095 220 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 ERVK-8P63133 956 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 PRKCQQ04759 706 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 SP140Q13342 867 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 GBX1Q14549 363 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 RBBP5Q15291 538 aaKnown RBP16.37■□□□□ 0.21
CPSF4-201ENST00000292476 VPS26BQ4G0F5 336 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 HMBOX1Q6NT76 420 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 TTC23LQ6PF05 361 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 GPRIN3Q6ZVF9 776 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 DET1Q7L5Y6 550 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 SYVN1Q86TM6 617 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 SATL1Q86VE3 508 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 LKAAEAR1Q8TD35 194 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 ELMO1Q92556 727 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 CCDC97Q96F63 343 aaPredicted RBP16.37■□□□□ 0.21
CPSF4-201ENST00000292476 SIPA1Q96FS4 1042 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 HIC2Q96JB3 615 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 CCM2Q9BSQ5 444 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 ANKRD60Q9BZ19 345 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 LEF1Q9UJU2 399 aaPredicted RBP16.37■□□□□ 0.21
CPSF4-201ENST00000292476 IKZF3Q9UKT9 509 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 GPR34Q9UPC5 381 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 DMTF1Q9Y222 760 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 ZNF318Q5VUA4 2279 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 A0A1W2PQF6 199 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 DHRS12A0PJE2 317 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 C7orf72A4D263 438 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 IFRD1O00458 451 aaPredicted RBP16.36■□□□□ 0.21
CPSF4-201ENST00000292476 PLRG1O43660 514 aaKnown RBP16.36■□□□□ 0.21
CPSF4-201ENST00000292476 ADAM23O75077 832 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 UMPSP11172 480 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 COL9A1P20849 921 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 PSMA4P25789 261 aaKnown RBP16.36■□□□□ 0.21
CPSF4-201ENST00000292476 GRIA3P42263 894 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 TAS2R38P59533 333 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 HSPA14Q0VDF9 509 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 SGCGQ13326 291 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 UBXN2BQ14CS0 331 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 BCL7AQ4VC05 210 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 MTX3Q5HYI7 312 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 KIAA1211LQ6NV74 962 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 CYP2R1Q6VVX0 501 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 ZNF852Q6ZMS4 543 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 KCNA7Q96RP8 456 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 HGH1Q9BTY7 390 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 MKRN2Q9H000 416 aaKnown RBP16.36■□□□□ 0.21
CPSF4-201ENST00000292476 SEMA4BQ9NPR2 832 aaPredicted RBP16.36■□□□□ 0.21
CPSF4-201ENST00000292476 PNPLA3Q9NST1 481 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 CMTM6Q9NX76 183 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 PLXNB3Q9ULL4 1909 aa16.36■□□□□ 0.21
CPSF4-201ENST00000292476 FAM234BA2RU67 622 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 KLHL33A6NCF5 533 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 ANTXRLA6NF34 631 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 IGLON5A6NGN9 336 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 SHISA7A6NL88 538 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 ZNF839A8K0R7 811 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 GPR89AB7ZAQ6 455 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 INPP4BO15327 924 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 FFAR2O15552 330 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 SOD1P00441 154 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 HIST1H2AGP0C0S8 130 aaPredicted RBP16.35■□□□□ 0.21
CPSF4-201ENST00000292476 GPR89BP0CG08 455 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 HIST1H2ADP20671 130 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 CCINQ13939 588 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 MAP7Q14244 749 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 PCBP2Q15366 365 aaKnown RBP eCLIP16.35■□□□□ 0.21
CPSF4-201ENST00000292476 FXNQ16595 210 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 AASDHQ4L235 1098 aaPredicted RBP16.35■□□□□ 0.21
CPSF4-201ENST00000292476 SYTL3Q4VX76 610 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 SULT1C3Q6IMI6 304 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 PNCKQ6P2M8 343 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 SBSNQ6UWP8 590 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 RNF165Q6ZSG1 346 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 GALNT13Q8IUC8 556 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 TCAIMQ8N3R3 496 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 SYNPOQ8N3V7 929 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 RASGEF1AQ8N9B8 481 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 PDPRQ8NCN5 879 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 CANT1Q8WVQ1 401 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 TMEM125Q96AQ2 219 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 TMEM159Q96B96 161 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 HIST1H2AHQ96KK5 128 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 HIST1H2AJQ99878 128 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 SLC39A3Q9BRY0 314 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 H2AFJQ9BTM1 129 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 RBM38Q9H0Z9 239 aaKnown RBP16.35■□□□□ 0.21
CPSF4-201ENST00000292476 AGPAT4Q9NRZ5 378 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 MMP17Q9ULZ9 603 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 NDRG2Q9UN36 371 aaKnown RBP16.35■□□□□ 0.21
CPSF4-201ENST00000292476 BTRCQ9Y297 605 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 MRPS17Q9Y2R5 130 aaKnown RBP16.35■□□□□ 0.21
CPSF4-201ENST00000292476 PTGDR2Q9Y5Y4 395 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 F5P12259 2224 aa16.35■□□□□ 0.21
CPSF4-201ENST00000292476 C17orf113A0A1B0GUU1 675 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms