RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 GPR149Q86SP6 731 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 TMEM102Q8N9M5 508 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-201ENST00000279247 GPR156Q8NFN8 814 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 IL17FQ96PD4 163 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 SLC6A17Q9H1V8 727 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 COQ10BQ9H8M1 238 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 SERGEFQ9UGK8 458 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 CDH7Q9ULB5 785 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 ATG2AQ2TAZ0 1938 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 MUC3AQ02505 3323 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 DHRS12A0PJE2 317 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 CASQ2O14958 399 aaPredicted RBP17.43■□□□□ 0.38
CAPN1-201ENST00000279247 POP7O75817 140 aaKnown RBP17.43■□□□□ 0.38
CAPN1-201ENST00000279247 C8BP07358 591 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 ZNF8P17098 575 aaPredicted RBP17.43■□□□□ 0.38
CAPN1-201ENST00000279247 NELFEP18615 380 aaKnown RBP17.43■□□□□ 0.38
CAPN1-201ENST00000279247 TRAP1Q12931 704 aaKnown RBP17.43■□□□□ 0.38
CAPN1-201ENST00000279247 THEMIS2Q5TEJ8 643 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 FRG2Q64ET8 278 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 TMPRSS11BQ86T26 416 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 PHACTR4Q8IZ21 702 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 CPA6Q8N4T0 437 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 USP7Q93009 1102 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 FRG2BQ96QU4 278 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 CGREF1Q99674 301 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 GDE1Q9NZC3 331 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 SCOCQ9UIL1 159 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 PDLIM1O00151 329 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 LATO43561 262 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 PGRP06401 933 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 RPL10P27635 214 aaKnown RBP17.43■□□□□ 0.38
CAPN1-201ENST00000279247 AP1S2P56377 157 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 DOC2AQ14183 400 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 ANKRD26P1Q6NSI1 321 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 OR10A6Q8NH74 314 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 OR4K3Q96R72 315 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 RAD18Q9NS91 495 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 KLHL42Q9P2K6 505 aa17.43■□□□□ 0.38
CAPN1-201ENST00000279247 TDRKHQ9Y2W6 561 aaKnown RBP17.43■□□□□ 0.38
CAPN1-201ENST00000279247 MYOCOSA0A1B0GUC4 107 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 A0A1W2PP55 124 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 TCRBV3S1A0A5B6 114 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 LYNP07948 512 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 RPS14P62263 151 aaKnown RBP17.42■□□□□ 0.38
CAPN1-201ENST00000279247 GTF2H3Q13889 308 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 EIF4HQ15056 248 aaKnown RBP17.42■□□□□ 0.38
CAPN1-201ENST00000279247 HMBOX1Q6NT76 420 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 DLEU7Q6UYE1 221 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 TRIM46Q7Z4K8 759 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 TCAIMQ8N3R3 496 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 LGR4Q9BXB1 951 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 SLC6A13Q9NSD5 602 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 OR1A2Q9Y585 309 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 PLXNA2O75051 1894 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 NUP210Q8TEM1 1887 aaPredicted RBP17.42■□□□□ 0.38
CAPN1-201ENST00000279247 SLC5A10A0PJK1 596 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 PEX1O43933 1283 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 IMPA1P29218 277 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 SLC7A1P30825 629 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 CDKL1Q00532 357 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 GRIK2Q13002 908 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 HEATR4Q86WZ0 1026 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 HID1Q8IV36 788 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 ZNF547Q8IVP9 402 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 TMIEQ8NEW7 156 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 FIG4Q92562 907 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 VPS35Q96QK1 796 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 SLC29A1Q99808 456 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 EFHD1Q9BUP0 239 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 IKZF5Q9H5V7 419 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 MOSPD1Q9UJG1 213 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 C1QTNF3-AMACRE9PGA6 284 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 SAP18O00422 153 aaKnown RBP17.42■□□□□ 0.38
CAPN1-201ENST00000279247 GBAP04062 536 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 MRPS35P82673 323 aaKnown RBP17.42■□□□□ 0.38
CAPN1-201ENST00000279247 SP140Q13342 867 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 KCNC3Q14003 757 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 ZNF513Q8N8E2 541 aaPredicted RBP17.42■□□□□ 0.38
CAPN1-201ENST00000279247 SLC29A3Q9BZD2 475 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 AP4B1Q9Y6B7 739 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 STON1Q9Y6Q2 735 aa17.42■□□□□ 0.38
CAPN1-201ENST00000279247 KCNH1O95259 989 aa17.41■□□□□ 0.38
CAPN1-201ENST00000279247 PAK4O96013 591 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-201ENST00000279247 PSMA4P25789 261 aaKnown RBP17.41■□□□□ 0.38
CAPN1-201ENST00000279247 MAD2L1Q13257 205 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-201ENST00000279247 CATSPEREQ5SY80 951 aa17.41■□□□□ 0.38
CAPN1-201ENST00000279247 GCNT7Q6ZNI0 430 aa17.41■□□□□ 0.38
CAPN1-201ENST00000279247 SGK2Q9HBY8 427 aa17.41■□□□□ 0.38
CAPN1-201ENST00000279247 SH2B3Q9UQQ2 575 aa17.41■□□□□ 0.38
CAPN1-201ENST00000279247 EIF3FO00303 357 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-201ENST00000279247 PSIP1O75475 530 aaKnown RBP17.41■□□□□ 0.38
CAPN1-201ENST00000279247 HSD17B1P14061 328 aa17.41■□□□□ 0.38
CAPN1-201ENST00000279247 JAK1P23458 1154 aa17.41■□□□□ 0.38
CAPN1-201ENST00000279247 MAT2AP31153 395 aaKnown RBP17.41■□□□□ 0.38
CAPN1-201ENST00000279247 USP39Q53GS9 565 aaKnown RBP17.41■□□□□ 0.38
CAPN1-201ENST00000279247 FAM83HQ6ZRV2 1179 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-201ENST00000279247 TDHQ8IZJ6 230 aa17.41■□□□□ 0.38
CAPN1-201ENST00000279247 NEIL2Q969S2 332 aa17.41■□□□□ 0.38
CAPN1-201ENST00000279247 OSBPL6Q9BZF3 934 aa17.41■□□□□ 0.38
CAPN1-201ENST00000279247 CXorf56Q9H5V9 222 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms