RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 KHDC1Q4VXA5 237 aaKnown RBP7.82□□□□□ -1.16
LIMD1-201ENST00000273317 ELOA3Q8NG57 546 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 LPPQ93052 612 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 AKT1S1Q96B36 256 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 SPATA7Q9P0W8 599 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 A0A0U1RQJ8 604 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 C2orf71A6NGG8 1288 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 ABHD15Q6UXT9 468 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 GPR142Q7Z601 462 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 SNX27Q96L92 541 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 SLC35A5Q9BS91 424 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF350Q9GZX5 532 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 B3GAT2Q9NPZ5 323 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 FAM105AQ9NUU6 356 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 CUEDC1Q9NWM3 386 aaPredicted RBP7.82□□□□□ -1.16
LIMD1-201ENST00000273317 FZD10Q9ULW2 581 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 PHF24Q9UPV7 400 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 TGFB1I1O43294 461 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 FAM155BO75949 473 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 PCCBP05166 539 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 PRKCDQ05655 676 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 PPP1R13LQ8WUF5 828 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 COQ8BQ96D53 544 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 CDCA5Q96FF9 252 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 SEZ6LQ9BYH1 1024 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 C1orf21Q9H246 121 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 MRPS30Q9NP92 439 aaKnown RBP7.82□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF358Q9NW07 568 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 SLC27A5Q9Y2P5 690 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 DNAJB5O75953 348 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 CD72P21854 359 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 VLDLRP98155 873 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 VMACQ2NL98 169 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 COLEC12Q5KU26 742 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 ANKRD23Q86SG2 305 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 COQ10BQ9H8M1 238 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 USP20Q9Y2K6 914 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 RCBTB2O95199 551 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 ARL2P36404 184 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 CDH13P55290 713 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 NRG3P56975 720 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 TAF10Q12962 218 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 GPR33Q49SQ1 333 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 FAM76BQ5HYJ3 339 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 SMARCD3Q6STE5 483 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF627Q7L945 461 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF366Q8N895 744 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 OR10G2Q8NGC3 310 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 HDAC2Q92769 488 aaKnown RBP7.81□□□□□ -1.16
LIMD1-201ENST00000273317 MIPEPQ99797 713 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 GTPBP2Q9BX10 602 aaKnown RBP7.81□□□□□ -1.16
LIMD1-201ENST00000273317 IGFLR1Q9H665 355 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 CHRAC1Q9NRG0 131 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 LRRC42Q9Y546 428 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 SDK1Q7Z5N4 2213 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 CLDN5O00501 218 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 LRCH4O75427 683 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 MTHFD1P11586 935 aaKnown RBP7.81□□□□□ -1.16
LIMD1-201ENST00000273317 ICAM3P32942 547 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 TPTEP56180 551 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 RPS14P62263 151 aaKnown RBP7.81□□□□□ -1.16
LIMD1-201ENST00000273317 CHST9Q7L1S5 443 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 ACBD6Q9BR61 282 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 ITPAQ9BY32 194 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 PCDHB16Q9NRJ7 776 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 XRN1Q8IZH2 1706 aaKnown RBP7.81□□□□□ -1.16
LIMD1-201ENST00000273317 A0A075B6Q4 140 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 C2CD4BA6NLJ0 364 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 RAB36O95755 333 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 IMPDH1P20839 514 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 HSD3B2P26439 372 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 DSG2Q14126 1118 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.81□□□□□ -1.16
LIMD1-201ENST00000273317 OR2T5Q6IEZ7 315 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 MBOAT1Q6ZNC8 495 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 OR2T29Q8NH02 315 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 C1orf216Q8TAB5 229 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 STOML3Q8TAV4 291 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 TNFRSF10DQ9UBN6 386 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 SPEF1Q9Y4P9 236 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 MRC1P22897 1456 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 GMFGO60234 142 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 CPNE3O75131 537 aaKnown RBP7.81□□□□□ -1.16
LIMD1-201ENST00000273317 C7P10643 843 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 VEGFAP15692 232 aaPredicted RBP7.81□□□□□ -1.16
LIMD1-201ENST00000273317 SLC15A1P46059 708 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 ATAT1Q5SQI0 421 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 SERPINA9Q86WD7 417 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 RDH12Q96NR8 316 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 DCSTAMPQ9H295 470 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 COQ9O75208 318 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 DUOXA1Q1HG43 343 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 PPM1JQ5JR12 505 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 ANKRD26P1Q6NSI1 321 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 ANKS1BQ7Z6G8 1248 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 HCAR2Q8TDS4 363 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 WFIKKN2Q8TEU8 576 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 TNFRSF25Q93038 417 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 SCN1AP35498 2009 aa7.81□□□□□ -1.16
LIMD1-201ENST00000273317 FAM149AA5PLN7 773 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms