RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 DOC2AQ14183 400 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 E2F2Q14209 437 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 ADGRE1Q14246 886 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 NFE2L1Q14494 772 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 LRRC36Q1X8D7 754 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 NANOGP8Q6NSW7 305 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 CYP2R1Q6VVX0 501 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 FAM83HQ6ZRV2 1179 aaPredicted RBP16.14■□□□□ 0.17
CCDC40-201ENST00000269318 MTSS1LQ765P7 747 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 PDSS2Q86YH6 399 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 HDDC3Q8N4P3 179 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 WDR20Q8TBZ3 569 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 ZNF480Q8WV37 535 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 ZUFSPQ96AP4 578 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 SLCO4A1Q96BD0 722 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 CMTM7Q96FZ5 175 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 MED8Q96G25 268 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 DPY30Q9C005 99 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 VCX3BQ9H321 246 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 CLMPQ9H6B4 373 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 NANOGQ9H9S0 305 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 DLGAP4Q9Y2H0 992 aa16.14■□□□□ 0.17
CCDC40-201ENST00000269318 A0A1W2PP55 124 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 RNASEH2AO75792 299 aaKnown RBP16.13■□□□□ 0.17
CCDC40-201ENST00000269318 CAPNS1P04632 268 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 PCCBP05166 539 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 TIE1P35590 1138 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 LTBRP36941 435 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 GSK3BP49841 420 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 SEC13P55735 322 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 RPS14P62263 151 aaKnown RBP16.13■□□□□ 0.17
CCDC40-201ENST00000269318 HTR4Q13639 388 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 PLA2G4EQ3MJ16 856 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 SFT2D3Q587I9 215 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 XKR6Q5GH73 641 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 HID1Q8IV36 788 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 SLC13A3Q8WWT9 602 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 ZBTB18Q99592 522 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 PKP2Q99959 881 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 LGR4Q9BXB1 951 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 COPS7BQ9H9Q2 264 aaPredicted RBP16.13■□□□□ 0.17
CCDC40-201ENST00000269318 C15orf38-AP3S2A0A0A6YYH1 394 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 ANHXE9PGG2 379 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 PCDH8O95206 1070 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 ACPPP15309 386 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 EEFSECP57772 596 aaKnown RBP16.13■□□□□ 0.17
CCDC40-201ENST00000269318 FAM174BQ3ZCQ3 159 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 GRHL2Q6ISB3 625 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 LCN8Q6JVE9 175 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 KIAA1211LQ6NV74 962 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 TRMT11Q7Z4G4 463 aaKnown RBP16.13■□□□□ 0.17
CCDC40-201ENST00000269318 ARPINQ7Z6K5 226 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 PTRH1Q86Y79 214 aaKnown RBP16.13■□□□□ 0.17
CCDC40-201ENST00000269318 KRTCAP2Q8N6L1 136 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 TMEM102Q8N9M5 508 aaPredicted RBP16.13■□□□□ 0.17
CCDC40-201ENST00000269318 OR2T34Q8NGX1 318 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 OR2T3Q8NH03 318 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 FAM131CQ96AQ9 280 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 APIPQ96GX9 242 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 MSLNLQ96KJ4 702 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 FCRL1Q96LA6 429 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 TMEM74Q96NL1 305 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 ZDHHC5Q9C0B5 715 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 OR52A5Q9H2C5 316 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 ALG2Q9H553 416 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 TMED5Q9Y3A6 229 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 AP4S1Q9Y587 144 aa16.13■□□□□ 0.17
CCDC40-201ENST00000269318 TICRRQ7Z2Z1 1910 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 H0YIV9 168 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 PRPS2P11908 318 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 AMD1P17707 334 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 SLC7A1P30825 629 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 HNF4AP41235 474 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 CLDN8P56748 225 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 LIPEQ05469 1076 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 CSTF3Q12996 717 aaKnown RBP16.12■□□□□ 0.17
CCDC40-201ENST00000269318 PWP1Q13610 501 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 FXNQ16595 210 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 SPANXN4Q5MJ08 99 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 IRAK1BP1Q5VVH5 260 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 ZNF776Q68DI1 518 aaPredicted RBP16.12■□□□□ 0.17
CCDC40-201ENST00000269318 LRRC56Q8IYG6 542 aaPredicted RBP16.12■□□□□ 0.17
CCDC40-201ENST00000269318 RNF175Q8N4F7 328 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 GTF2H4Q92759 462 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 LRGUKQ96M69 825 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 GABRG3Q99928 467 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 TEX101Q9BY14 249 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 MBNL1Q9NR56 388 aaKnown RBP16.12■□□□□ 0.17
CCDC40-201ENST00000269318 CLDND1Q9NY35 253 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 GPRC5BQ9NZH0 403 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 ACTR3BQ9P1U1 418 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 EGFL7Q9UHF1 273 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 ZFR2Q9UPR6 939 aaKnown RBP16.12■□□□□ 0.17
CCDC40-201ENST00000269318 PRKAB1Q9Y478 270 aa16.12■□□□□ 0.17
CCDC40-201ENST00000269318 SPTBN5Q9NRC6 3674 aaKnown RBP16.11■□□□□ 0.17
CCDC40-201ENST00000269318 AQP12BA6NM10 295 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 IL6P05231 212 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 PGRP06401 933 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 SDC1P18827 310 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 FGL2Q14314 439 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms