RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 CTBP1Q13363 440 aa12.33□□□□□ -0.44
PRPF6-201ENST00000266079 TBPL2Q6SJ96 375 aa12.33□□□□□ -0.44
PRPF6-201ENST00000266079 Q6ZS52 159 aa12.33□□□□□ -0.44
PRPF6-201ENST00000266079 NUDT18Q6ZVK8 323 aa12.33□□□□□ -0.44
PRPF6-201ENST00000266079 LARP4Q71RC2 724 aaKnown RBP eCLIP12.33□□□□□ -0.441e-7■■■■□ 21.3
PRPF6-201ENST00000266079 VASH1Q7L8A9 365 aaPredicted RBP12.33□□□□□ -0.44
PRPF6-201ENST00000266079 R3HCC1LQ7Z5L2 792 aaKnown RBP12.33□□□□□ -0.44
PRPF6-201ENST00000266079 METTL3Q86U44 580 aaKnown RBP12.33□□□□□ -0.44
PRPF6-201ENST00000266079 DENND6AQ8IWF6 608 aa12.33□□□□□ -0.44
PRPF6-201ENST00000266079 HOMEZQ8IX15 550 aa12.33□□□□□ -0.44
PRPF6-201ENST00000266079 KLHDC8BQ8IXV7 354 aa12.33□□□□□ -0.44
PRPF6-201ENST00000266079 ZCCHC7Q8N3Z6 543 aaKnown RBP12.33□□□□□ -0.44
PRPF6-201ENST00000266079 KIAA1958Q8N8K9 716 aa12.33□□□□□ -0.44
PRPF6-201ENST00000266079 FAM3CQ92520 227 aa12.33□□□□□ -0.44
PRPF6-201ENST00000266079 NECAB3Q96P71 396 aaPredicted RBP12.33□□□□□ -0.44
PRPF6-201ENST00000266079 CEP44Q9C0F1 390 aa12.33□□□□□ -0.44
PRPF6-201ENST00000266079 THAP10Q9P2Z0 257 aaPredicted RBP12.33□□□□□ -0.44
PRPF6-201ENST00000266079 CD84Q9UIB8 345 aa12.33□□□□□ -0.44
PRPF6-201ENST00000266079 A0A0J9YYE9 177 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.32□□□□□ -0.44
PRPF6-201ENST00000266079 TCRBV5S2A0A599 114 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 C16orf96A6NNT2 1141 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 FXYD1O00168 92 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 NR5A2O00482 541 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 TOR1BO14657 336 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 LDB2O43679 373 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 STMN1P16949 149 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 XPAP23025 273 aaPredicted RBP12.32□□□□□ -0.44
PRPF6-201ENST00000266079 DMPKQ09013 629 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 ZIK1Q3SY52 487 aaPredicted RBP12.32□□□□□ -0.44
PRPF6-201ENST00000266079 SLC22A16Q86VW1 577 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 SGCDQ92629 289 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 EID2BQ96D98 161 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 HOXD1Q9GZZ0 328 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 ADNPQ9H2P0 1102 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 TMEM245Q9H330 911 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 ARNT2Q9HBZ2 717 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 PRSS16Q9NQE7 514 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 ANAPC2Q9UJX6 822 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 FBXL21Q9UKT6 434 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 FRYLO94915 3013 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 PSMD11O00231 422 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 FZD6O60353 706 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 DEAF1O75398 565 aaPredicted RBP12.32□□□□□ -0.44
PRPF6-201ENST00000266079 CES1P23141 567 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 SLC6A2P23975 617 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 KIR2DL1P43626 348 aaPredicted RBP12.32□□□□□ -0.44
PRPF6-201ENST00000266079 CTF1Q16619 201 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 TMEM31Q5JXX7 168 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 ATAD3BQ5T9A4 648 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 OR13J1Q8NGT2 312 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 RPLP0P6Q8NHW5 317 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 CYP4F12Q9HCS2 524 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 EPOP01588 193 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 TRBC1P01850 177 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 ALDOCP09972 364 aaKnown RBP12.32□□□□□ -0.44
PRPF6-201ENST00000266079 UMPSP11172 480 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 MTHFD1P11586 935 aaKnown RBP12.32□□□□□ -0.44
PRPF6-201ENST00000266079 SRFP11831 508 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 EIF2DP41214 584 aaKnown RBP12.32□□□□□ -0.44
PRPF6-201ENST00000266079 POLD2P49005 469 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 KPNA2P52292 529 aaKnown RBP12.32□□□□□ -0.44
PRPF6-201ENST00000266079 ZP2Q05996 745 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 CAPRIN1Q14444 709 aaKnown RBP12.32□□□□□ -0.44
PRPF6-201ENST00000266079 UGP2Q16851 508 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 PARS2Q7L3T8 475 aaKnown RBP12.32□□□□□ -0.44
PRPF6-201ENST00000266079 THAP5Q7Z6K1 395 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 RALGPS2Q86X27 583 aaPredicted RBP12.32□□□□□ -0.44
PRPF6-201ENST00000266079 IL17RCQ8NAC3 791 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 PIK3C3Q8NEB9 887 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 GANCQ8TET4 914 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 HEXDCQ8WVB3 486 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 OR8D1Q8WZ84 308 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 MUL1Q969V5 352 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 FAM129BQ96TA1 746 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 WRAP53Q9BUR4 548 aaKnown RBP12.32□□□□□ -0.44
PRPF6-201ENST00000266079 KIFC1Q9BW19 673 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 MUC13Q9H3R2 512 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 MOV10Q9HCE1 1003 aaKnown RBP12.32□□□□□ -0.44
PRPF6-201ENST00000266079 B4GALT6Q9UBX8 382 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 FKBPLQ9UIM3 349 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 BAG5Q9UL15 447 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 FAM50BQ9Y247 325 aa12.32□□□□□ -0.44
PRPF6-201ENST00000266079 ARIH1Q9Y4X5 557 aaPredicted RBP12.32□□□□□ -0.44
PRPF6-201ENST00000266079 EDDM13A0A1B0GTR0 161 aa12.31□□□□□ -0.44
PRPF6-201ENST00000266079 FAM95CA0A1B0GW59 222 aa12.31□□□□□ -0.44
PRPF6-201ENST00000266079 ATP6AP2A0A1C7CYW4 349 aa12.31□□□□□ -0.44
PRPF6-201ENST00000266079 NUAK1O60285 661 aa12.31□□□□□ -0.44
PRPF6-201ENST00000266079 ATP6AP2O75787 350 aa12.31□□□□□ -0.44
PRPF6-201ENST00000266079 BMP4P12644 408 aa12.31□□□□□ -0.44
PRPF6-201ENST00000266079 ARNTP27540 789 aa12.31□□□□□ -0.44
PRPF6-201ENST00000266079 SERPINB1P30740 379 aa12.31□□□□□ -0.44
PRPF6-201ENST00000266079 MAPK8P45983 427 aa12.31□□□□□ -0.44
PRPF6-201ENST00000266079 CDKN1CP49918 316 aaPredicted RBP12.31□□□□□ -0.44
PRPF6-201ENST00000266079 YBX1P67809 324 aaKnown RBP12.31□□□□□ -0.44
PRPF6-201ENST00000266079 UBXN2BQ14CS0 331 aa12.31□□□□□ -0.44
PRPF6-201ENST00000266079 SPATS1Q496A3 300 aa12.31□□□□□ -0.44
PRPF6-201ENST00000266079 VPS26BQ4G0F5 336 aa12.31□□□□□ -0.44
PRPF6-201ENST00000266079 TMEM196Q5HYL7 178 aa12.31□□□□□ -0.44
PRPF6-201ENST00000266079 ZNF470Q6ECI4 717 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms