RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 B3GALT2O43825 422 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 SOCS5O75159 536 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 PGLSO95336 258 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 DLDP09622 509 aaKnown RBP13.68□□□□□ -0.22
CDH3-201ENST00000264012 CSF2RAP15509 400 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 ECHS1P30084 290 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 CASP9P55211 416 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 OR4F3Q6IEY1 312 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 HMGB4Q8WW32 186 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 AP3S1Q92572 193 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 CLIC1O00299 241 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 MANBAO00462 879 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 EI24O14681 340 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 NME6O75414 186 aaPredicted RBP13.67□□□□□ -0.22
CDH3-201ENST00000264012 OAZ2O95190 189 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 MORN1Q5T089 497 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 ZNF783Q6ZMS7 281 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 SLCO6A1Q86UG4 719 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 TFGQ92734 400 aaPredicted RBP13.67□□□□□ -0.22
CDH3-201ENST00000264012 SLC22A18Q96BI1 424 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 KCNA7Q96RP8 456 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 NODALQ96S42 347 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 MOCS1Q9NZB8 636 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 CFAP20Q9Y6A4 193 aaKnown RBP13.67□□□□□ -0.22
CDH3-201ENST00000264012 STX16O14662 325 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 IVDP26440 423 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 UFM1P61960 85 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 ZNF678Q5SXM1 525 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 POMZP3Q6PJE2 187 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 TMEM135Q86UB9 458 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 TMC8Q8IU68 726 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 TRIM63Q969Q1 353 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 POPDC3Q9HBV1 291 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 PDE10AQ9Y233 779 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 NOBOXO60393 691 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 GADD45GO95257 159 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 HLA-EP13747 358 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 GJA5P36382 358 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 LEPRP48357 1165 aaKnown RBP13.67□□□□□ -0.22
CDH3-201ENST00000264012 UBXN2BQ14CS0 331 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 SPIN4Q56A73 249 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 AGTRAPQ6RW13 159 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 SMPDL3AQ92484 453 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 PEX13Q92968 403 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 CNPPD1Q9BV87 410 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 TPK1Q9H3S4 243 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 FBXL12Q9NXK8 326 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 GPN3Q9UHW5 284 aaPredicted RBP13.67□□□□□ -0.22
CDH3-201ENST00000264012 PLK4O00444 970 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 TFPIP10646 304 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 RCVRNP35243 200 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 DNAJB13P59910 316 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 EMC10Q5UCC4 262 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 FAM171BQ6P995 826 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 SLC2A7Q6PXP3 512 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 CDHR3Q6ZTQ4 885 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 PIGXQ8TBF5 258 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 NAT14Q8WUY8 206 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 EZH1Q92800 747 aaPredicted RBP13.67□□□□□ -0.22
CDH3-201ENST00000264012 C1orf21Q9H246 121 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 MRPL39Q9NYK5 338 aaKnown RBP13.67□□□□□ -0.22
CDH3-201ENST00000264012 TAC3Q9UHF0 121 aa13.67□□□□□ -0.22
CDH3-201ENST00000264012 PPIEQ9UNP9 301 aaKnown RBP13.67□□□□□ -0.22
CDH3-201ENST00000264012 PTX3P26022 381 aaPredicted RBP13.66□□□□□ -0.22
CDH3-201ENST00000264012 NDUFS1P28331 727 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 GSK3BP49841 420 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 KHKP50053 298 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 SRP54P61011 504 aaKnown RBP13.66□□□□□ -0.22
CDH3-201ENST00000264012 PYDC2Q56P42 97 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 DENND5AQ6IQ26 1287 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 NPWQ8N729 165 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 OR5K1Q8NHB7 308 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 PXYLP1Q8TE99 480 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 BORCS5Q969J3 196 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 PSMD11O00231 422 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 STC2O76061 302 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 EBLN1P0CF75 366 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 G6PDP11413 515 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 CDH1P12830 882 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 NCBP2P52298 156 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDH3-201ENST00000264012 RAPSNQ13702 412 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 TP53INP2Q8IXH6 220 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 PEX5LQ8IYB4 626 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 METTL21AQ8WXB1 218 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 OTUB2Q96DC9 234 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 RETREG1Q9H6L5 497 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 FLRT1Q9NZU1 646 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 MYH8P13535 1937 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 A0A1W2PP18 115 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 ZNF8P17098 575 aaPredicted RBP13.66□□□□□ -0.22
CDH3-201ENST00000264012 NFATC2Q13469 925 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 ZNF846Q147U1 533 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 ZNF776Q68DI1 518 aaPredicted RBP13.66□□□□□ -0.22
CDH3-201ENST00000264012 HDDC2Q7Z4H3 204 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 TMEM145Q8NBT3 493 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 ST13P5Q8NFI4 369 aaPredicted RBP13.66□□□□□ -0.22
CDH3-201ENST00000264012 TUBGCP5Q96RT8 1024 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 CXorf21Q9HAI6 301 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 MAGEE1Q9HCI5 957 aa13.66□□□□□ -0.22
CDH3-201ENST00000264012 FBRSL1Q9HCM7 1045 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms