RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 PDGFBP01127 241 aaPredicted RBP22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 AK4P27144 223 aaPredicted RBP22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 HSD17B2P37059 387 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 RPL6Q02878 288 aaKnown RBP22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 EIF2B5Q13144 721 aaKnown RBP22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 CHIT1Q13231 466 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 E2F2Q14209 437 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 FZD2Q14332 565 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 CYP2A13Q16696 494 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 LIPJQ5W064 366 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 OGFOD2Q6N063 350 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 Q6ZSR9 355 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 MYLK4Q86YV6 388 aaPredicted RBP22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 RGL4Q8IZJ4 473 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 DEFB119Q8N690 84 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 CCL4L1Q8NHW4 92 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 USP7Q93009 1102 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 SLC7A6OSQ96CW6 309 aaPredicted RBP22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 MVB12BQ9H7P6 319 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 IMP3Q9NV31 184 aaKnown RBP22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 RIC8BQ9NVN3 520 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 SCHIP1Q9P0W5 487 aaPredicted RBP22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 GIMAP2Q9UG22 337 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 TAGLN3Q9UI15 199 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 EML5Q05BV3 1969 aa22.18■■□□□ 1.14
SMARCB1-201ENST00000263121 E7EQ34 232 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 PI15O43692 258 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 TNFP01375 233 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 ALDOCP09972 364 aaKnown RBP22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 LBPP18428 481 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 HALP42357 657 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 CORO7P57737 925 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 NAA25Q14CX7 972 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 RPE65Q16518 533 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 USP39Q53GS9 565 aaKnown RBP22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 SLC36A4Q6YBV0 504 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 ASRGL1Q7L266 308 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 NRROSQ86YC3 692 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 LMNTD1Q8N9Z9 388 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 KLHDC7BQ96G42 594 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 CCDC177Q9NQR7 707 aaPredicted RBP22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 AASDHPPTQ9NRN7 309 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 MRGBPQ9NV56 204 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 CCL27Q9Y4X3 112 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 KCNE2Q9Y6J6 123 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 OR52A4PA6NMU1 304 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 CLGNO14967 610 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 DNAJC8O75937 253 aaPredicted RBP22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 KRT6AP02538 564 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 KRT6BP04259 564 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 ESRRAP11474 423 aaPredicted RBP22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 MTHFD1P11586 935 aaKnown RBP22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 JUPP14923 745 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 NPPBP16860 134 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 CD22P20273 847 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 CCND1P24385 295 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 PRDX6P30041 224 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 KRT6CP48668 564 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 IRF8Q02556 426 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 CPSF6Q16630 551 aaKnown RBP eCLIP22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 TRIM46Q7Z4K8 759 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 CAMK1GQ96NX5 476 aa22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 NECAB3Q96P71 396 aaPredicted RBP22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 FARSBQ9NSD9 589 aaKnown RBP22.17■■□□□ 1.14
SMARCB1-201ENST00000263121 A0A1W2PR77 199 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 A6NCN8 305 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 ULK1O75385 1050 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 EML2O95834 649 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 GNAZP19086 355 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 PIK3R1P27986 724 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 HOXA6P31267 233 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 ACTR1BP42025 376 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 CASP2P42575 452 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 ATP4BP51164 291 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 ACTR1AP61163 376 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 DMWDQ09019 674 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 DOC2AQ14183 400 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 SQLEQ14534 574 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 XKR6Q5GH73 641 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 SUSD1Q6UWL2 747 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 DCP2Q8IU60 420 aaKnown RBP22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 MFSD2AQ8NA29 543 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 SETD7Q8WTS6 366 aaKnown RBP22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 NEIL2Q969S2 332 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 HBEGFQ99075 208 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 MIPEPQ99797 713 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 LRMDAQ9H2I8 198 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 ZNF490Q9ULM2 529 aaPredicted RBP22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 SNX6Q9UNH7 406 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 HEBP2Q9Y5Z4 205 aa22.16■■□□□ 1.14
SMARCB1-201ENST00000263121 ZNF839A8K0R7 811 aa22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 PEX11AO75192 247 aa22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 BCKDHBP21953 392 aa22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 RASSF2P50749 326 aa22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 ZRSR2Q15696 482 aaKnown RBP22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 GRHL2Q6ISB3 625 aa22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 SLC30A9Q6PML9 568 aa22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 LCTLQ6UWM7 567 aa22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 SLCO4C1Q6ZQN7 724 aa22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 SPATA19Q7Z5L4 167 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms