RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 FAM219BQ5XKK7 198 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 DYDC1Q8WWB3 177 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 CXorf40BQ96DE9 158 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 TMEM237Q96Q45 408 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 ATG10Q9H0Y0 220 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 ABCF3Q9NUQ8 709 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 OXSMQ9NWU1 459 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 SPEGQ15772 3267 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 SYCE1LA8MT33 242 aa26.68■■□□□ 1.86
SMARCD3-201ENST00000262188 E2F6O75461 281 aa26.68■■□□□ 1.86
SMARCD3-201ENST00000262188 HIST1H2AGP0C0S8 130 aaPredicted RBP26.68■■□□□ 1.86
SMARCD3-201ENST00000262188 TAC1P20366 129 aa26.68■■□□□ 1.86
SMARCD3-201ENST00000262188 HIST1H2ADP20671 130 aa26.68■■□□□ 1.86
SMARCD3-201ENST00000262188 DCUN1D3Q8IWE4 304 aa26.68■■□□□ 1.86
SMARCD3-201ENST00000262188 PYCR2Q96C36 320 aa26.68■■□□□ 1.86
SMARCD3-201ENST00000262188 RHBDF1Q96CC6 855 aa26.68■■□□□ 1.86
SMARCD3-201ENST00000262188 HIST1H2AHQ96KK5 128 aa26.68■■□□□ 1.86
SMARCD3-201ENST00000262188 HIST1H2AJQ99878 128 aa26.68■■□□□ 1.86
SMARCD3-201ENST00000262188 H2AFJQ9BTM1 129 aa26.68■■□□□ 1.86
SMARCD3-201ENST00000262188 NUDT4Q9NZJ9 180 aa26.68■■□□□ 1.86
SMARCD3-201ENST00000262188 RALGAPA1Q6GYQ0 2036 aa26.68■■□□□ 1.86
SMARCD3-201ENST00000262188 KHNYNO15037 678 aaKnown RBP26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 FGF3P11487 239 aaPredicted RBP26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 RDH11Q8TC12 318 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 CAMK1GQ96NX5 476 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 TMEM79Q9BSE2 394 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 ZNF395Q9H8N7 513 aaPredicted RBP26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 RDH14Q9HBH5 336 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 SCOCQ9UIL1 159 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 LNP1A1A4G5 178 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 IPO13O94829 963 aaKnown RBP26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 ENO2P09104 434 aaPredicted RBP26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 TSPAN8P19075 237 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 HSPA7P48741 367 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 FASTKQ14296 549 aaKnown RBP26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 CHI3L2Q15782 390 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 OR52E8Q6IFG1 317 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 KANSL1Q7Z3B3 1105 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 TBC1D21Q8IYX1 336 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 SFRP1Q8N474 314 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 SAP25Q8TEE9 199 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 TRIM54Q9BYV2 358 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 RXFP3Q9NSD7 469 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 CPNE7Q9UBL6 633 aa26.67■■□□□ 1.86
SMARCD3-201ENST00000262188 NOBOXO60393 691 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 IMPA1P29218 277 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 NAGLUP54802 743 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 SPEM2Q0P670 501 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 TMEM154Q6P9G4 183 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 DNAJC14Q6Y2X3 702 aaPredicted RBP26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 TRIM48Q8IWZ4 208 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 MINDY1Q8N5J2 469 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 CCNYL1Q8N7R7 359 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 PDPRQ8NCN5 879 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 OR52E1Q8NGJ3 308 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 OR9A1PQ8NGU1 263 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 NSUN5Q96P11 429 aaKnown RBP26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 PRRX2Q99811 253 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 GALNT8Q9NY28 637 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 WWOXQ9NZC7 414 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 STOX2Q9P2F5 926 aaPredicted RBP26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 KLK8O60259 260 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 S100BP04271 92 aaPredicted RBP26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 RETP07949 1114 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 ANXA5P08758 320 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 EEF1DP29692 281 aaKnown RBP26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 PRKAA2P54646 552 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 TSTA3Q13630 321 aaPredicted RBP26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 ATG14Q6ZNE5 492 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 KYQ8NBH2 561 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 ZNF480Q8WV37 535 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 MENTQ9BUN1 341 aa26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 GATA5Q9BWX5 397 aaPredicted RBP26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 PTBP2Q9UKA9 531 aaKnown RBP26.66■■□□□ 1.86
SMARCD3-201ENST00000262188 ARID1BQ8NFD5 2236 aaPredicted RBP26.65■■□□□ 1.86
SMARCD3-201ENST00000262188 A0A1B0GVG6 124 aa26.65■■□□□ 1.86
SMARCD3-201ENST00000262188 PABPN1LA6NDY0 278 aaKnown RBP26.65■■□□□ 1.86
SMARCD3-201ENST00000262188 SYPP08247 313 aa26.65■■□□□ 1.86
SMARCD3-201ENST00000262188 UBE2IP63279 158 aaKnown RBP26.65■■□□□ 1.86
SMARCD3-201ENST00000262188 SMYD1Q8NB12 490 aa26.65■■□□□ 1.86
SMARCD3-201ENST00000262188 RAD51AP1Q96B01 352 aa26.65■■□□□ 1.86
SMARCD3-201ENST00000262188 TRIM38O00635 465 aa26.64■■□□□ 1.86
SMARCD3-201ENST00000262188 CALB2P22676 271 aa26.64■■□□□ 1.86
SMARCD3-201ENST00000262188 ARRB2P32121 409 aa26.64■■□□□ 1.86
SMARCD3-201ENST00000262188 ALDH18A1P54886 795 aaKnown RBP26.64■■□□□ 1.86
SMARCD3-201ENST00000262188 POLE2P56282 527 aa26.64■■□□□ 1.86
SMARCD3-201ENST00000262188 BNIP1Q12981 228 aa26.64■■□□□ 1.86
SMARCD3-201ENST00000262188 LIPMQ5VYY2 423 aa26.64■■□□□ 1.86
SMARCD3-201ENST00000262188 TTC23LQ6PF05 361 aa26.64■■□□□ 1.86
SMARCD3-201ENST00000262188 FBXO15Q8NCQ5 510 aaPredicted RBP26.64■■□□□ 1.86
SMARCD3-201ENST00000262188 CCDC138Q96M89 665 aa26.64■■□□□ 1.86
SMARCD3-201ENST00000262188 PDP2Q9P2J9 529 aa26.64■■□□□ 1.86
SMARCD3-201ENST00000262188 MID2Q9UJV3 735 aa26.64■■□□□ 1.86
SMARCD3-201ENST00000262188 TRIM13O60858 407 aa26.64■■□□□ 1.85
SMARCD3-201ENST00000262188 CER1O95813 267 aa26.64■■□□□ 1.85
SMARCD3-201ENST00000262188 VIPP01282 170 aa26.64■■□□□ 1.85
SMARCD3-201ENST00000262188 MAPK9P45984 424 aa26.64■■□□□ 1.85
SMARCD3-201ENST00000262188 CDH13P55290 713 aa26.64■■□□□ 1.85
SMARCD3-201ENST00000262188 AP1S2P56377 157 aa26.64■■□□□ 1.85
SMARCD3-201ENST00000262188 GPR18Q14330 331 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms