RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 ENO1P06733 434 aaKnown RBP16.97■□□□□ 0.31
SRSF1-201ENST00000258962 HIST1H2AGP0C0S8 130 aaPredicted RBP16.97■□□□□ 0.31
SRSF1-201ENST00000258962 MYCLP1P12525 358 aaPredicted RBP16.97■□□□□ 0.31
SRSF1-201ENST00000258962 HIST1H2ADP20671 130 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 BDKRB1P46663 353 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 SLC6A12P48065 614 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 ARRB1P49407 418 aaPredicted RBP16.97■□□□□ 0.31
SRSF1-201ENST00000258962 NFE2L1Q14494 772 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 ZNF423Q2M1K9 1284 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 CCSMST1Q4G0I0 132 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 PRAMEF14Q5SWL7 426 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 NXNQ6DKJ4 435 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 Q6ZSR6 202 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 ABI3BPQ7Z7G0 1075 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 DCP2Q8IU60 420 aaKnown RBP16.97■□□□□ 0.31
SRSF1-201ENST00000258962 TCAIMQ8N3R3 496 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 OXR1Q8N573 874 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 DCBLD1Q8N8Z6 715 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 MCOLN3Q8TDD5 553 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 HIST1H2AHQ96KK5 128 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 ELF4Q99607 663 aaPredicted RBP16.97■□□□□ 0.31
SRSF1-201ENST00000258962 HIST1H2AJQ99878 128 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 H2AFJQ9BTM1 129 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 SLC32A1Q9H598 525 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 IPPKQ9H8X2 491 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 PHPT1Q9NRX4 125 aaPredicted RBP16.97■□□□□ 0.31
SRSF1-201ENST00000258962 SLC23A2Q9UGH3 650 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 LNPEPQ9UIQ6 1025 aa16.97■□□□□ 0.31
SRSF1-201ENST00000258962 STK16O75716 305 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 EPORP19235 508 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 RABIFP47224 123 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 HNMTP50135 292 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 CCT8P50990 548 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 GCNT7Q6ZNI0 430 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 LRRTM4Q86VH4 590 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 C10orf67Q8IYJ2 551 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 OR13H1Q8NG92 308 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 OR4F6Q8NGB9 312 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 CEP70Q8NHQ1 597 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 FBXL8Q96CD0 374 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 KLHL29Q96CT2 875 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 BMFQ96LC9 184 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 CATSPER2Q96P56 530 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 RAB3IPQ96QF0 476 aaPredicted RBP16.96■□□□□ 0.31
SRSF1-201ENST00000258962 LRMDAQ9H2I8 198 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 ERVMER34-1Q9H9K5 563 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 BTRCQ9Y297 605 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 STK38LQ9Y2H1 464 aa16.96■□□□□ 0.31
SRSF1-201ENST00000258962 CNOT1A5YKK6 2376 aaKnown RBP16.96■□□□□ 0.31
SRSF1-201ENST00000258962 POM121BA6NF01 834 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 GPR89AB7ZAQ6 455 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 YKT6O15498 198 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 OTCP00480 354 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 CATP04040 527 aaKnown RBP16.96■□□□□ 0.3
SRSF1-201ENST00000258962 FUCA1P04066 466 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 GPR89BP0CG08 455 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 UROSP10746 265 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 CSRP1P21291 193 aaKnown RBP16.96■□□□□ 0.3
SRSF1-201ENST00000258962 CALB2P22676 271 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 KLF10Q13118 480 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 TTC23LQ6PF05 361 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 CHSY3Q70JA7 882 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 LARP4Q71RC2 724 aaKnown RBP eCLIP16.96■□□□□ 0.3
SRSF1-201ENST00000258962 LRRC70Q7Z2Q7 622 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 AMZ2Q86W34 360 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 KIF2BQ8N4N8 673 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 CPSF7Q8N684 471 aaKnown RBP16.96■□□□□ 0.3
SRSF1-201ENST00000258962 CDYL2Q8N8U2 506 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 MARK4Q96L34 752 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 APOOQ9BUR5 198 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 ZMYND15Q9H091 742 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 TAGLN3Q9UI15 199 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 G3BP2Q9UN86 482 aaKnown RBP16.96■□□□□ 0.3
SRSF1-201ENST00000258962 ANGPTL3Q9Y5C1 460 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 PCDHGB2Q9Y5G2 931 aa16.96■□□□□ 0.3
SRSF1-201ENST00000258962 A0A1B0GTQ1 180 aa16.95■□□□□ 0.3
SRSF1-201ENST00000258962 ATP6AP2A0A1C7CYW4 349 aa16.95■□□□□ 0.3
SRSF1-201ENST00000258962 PABPN1LA6NDY0 278 aaKnown RBP16.95■□□□□ 0.3
SRSF1-201ENST00000258962 GIPC1O14908 333 aa16.95■□□□□ 0.3
SRSF1-201ENST00000258962 CRCPO75575 148 aa16.95■□□□□ 0.3
SRSF1-201ENST00000258962 ATP6AP2O75787 350 aa16.95■□□□□ 0.3
SRSF1-201ENST00000258962 ESRRAP11474 423 aaPredicted RBP16.95■□□□□ 0.3
SRSF1-201ENST00000258962 CD59P13987 128 aa16.95■□□□□ 0.3
SRSF1-201ENST00000258962 MAP4P27816 1152 aaKnown RBP16.95■□□□□ 0.3
SRSF1-201ENST00000258962 ACADLP28330 430 aa16.95■□□□□ 0.3
SRSF1-201ENST00000258962 MAPK9P45984 424 aa16.95■□□□□ 0.3
SRSF1-201ENST00000258962 KCNJ2P63252 427 aa16.95■□□□□ 0.3
SRSF1-201ENST00000258962 PLOD1Q02809 727 aaPredicted RBP16.95■□□□□ 0.3
SRSF1-201ENST00000258962 CDC16Q13042 620 aa16.95■□□□□ 0.3
SRSF1-201ENST00000258962 PTCHD3Q3KNS1 767 aa16.95■□□□□ 0.3
SRSF1-201ENST00000258962 TCHHL1Q5QJ38 904 aaPredicted RBP16.95■□□□□ 0.3
SRSF1-201ENST00000258962 FBXO15Q8NCQ5 510 aaPredicted RBP16.95■□□□□ 0.3
SRSF1-201ENST00000258962 SETD7Q8WTS6 366 aaKnown RBP16.95■□□□□ 0.3
SRSF1-201ENST00000258962 OR52A5Q9H2C5 316 aa16.95■□□□□ 0.3
SRSF1-201ENST00000258962 RASSF4Q9H2L5 321 aa16.95■□□□□ 0.3
SRSF1-201ENST00000258962 DPEP2Q9H4A9 486 aa16.95■□□□□ 0.3
SRSF1-201ENST00000258962 MRGBPQ9NV56 204 aa16.95■□□□□ 0.3
SRSF1-201ENST00000258962 DNMT3AQ9Y6K1 912 aaPredicted RBP16.95■□□□□ 0.3
SRSF1-201ENST00000258962 DMXL1Q9Y485 3027 aa16.95■□□□□ 0.3
SRSF1-201ENST00000258962 TOR1BO14657 336 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms