RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 C4orf22Q6V702 233 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 FAM26EQ8N5C1 309 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 RBMXL3Q8N7X1 1067 aaKnown RBP18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 OR2Y1Q8NGV0 311 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 MAIP1Q8WWC4 291 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 KIFC1Q9BW19 673 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 VPS4AQ9UN37 437 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 ZKSCAN5Q9Y2L8 839 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 DPM1O60762 260 aa18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 NIPSNAP2O75323 286 aa18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 C1orf105O95561 183 aa18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 UMODP07911 640 aa18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 ITGAXP20702 1163 aa18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 RPS3P23396 243 aaKnown RBP eCLIP18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 PPP1R32Q7Z5V6 425 aa18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 MPP5Q8N3R9 675 aa18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 PRELID2Q8N945 189 aa18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 Q8NA96 180 aa18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 RAD51AP1Q96B01 352 aa18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 PTERQ96BW5 349 aa18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 BIRC8Q96P09 236 aa18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 TRIM56Q9BRZ2 755 aaKnown RBP18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 P4HTMQ9NXG6 502 aa18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 CRYL1Q9Y2S2 319 aa18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 MAP4K5Q9Y4K4 846 aa18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 PCDHGB7Q9Y5F8 929 aa18.25■□□□□ 0.51
TM6SF1-201ENST00000258909 SPTBN1Q01082 2364 aaKnown RBP18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 PEX12O00623 359 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 PRICKLE3O43900 615 aaPredicted RBP18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 F7P08709 466 aaPredicted RBP18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 GCGRP47871 477 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 INPP5JQ15735 1006 aaPredicted RBP18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 DCAF10Q5QP82 559 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 SLC6A19Q695T7 634 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 ZNF662Q6ZS27 426 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 SDCCAG8Q86SQ7 713 aaPredicted RBP18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 LRRC6Q86X45 466 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 SPNS2Q8IVW8 549 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 DTWD1Q8N5C7 304 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 METTL27Q8N6F8 245 aaPredicted RBP18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 TRIM58Q8NG06 486 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 DENND1AQ8TEH3 1009 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 LPGAT1Q92604 370 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 SMAD5Q99717 465 aaKnown RBP18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 MIPEPQ99797 713 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 SLAMF7Q9NQ25 335 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 INTS7Q9NVH2 962 aaKnown RBP18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 IL1RAPL1Q9NZN1 696 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 MAP10Q9P2G4 905 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 GALPQ9UBC7 116 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 SOX13Q9UN79 622 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 ESPL1Q14674 2120 aa18.24■□□□□ 0.51
TM6SF1-201ENST00000258909 AP3B1O00203 1094 aa18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 KPNA5O15131 536 aa18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 NRP2O60462 931 aa18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 CTSVO60911 334 aa18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 TPSB2P20231 275 aa18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 YBX1P67809 324 aaKnown RBP18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 GPS1Q13098 491 aa18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 TPSAB1Q15661 275 aa18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 ANKRD22Q5VYY1 191 aa18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 MRNIPQ6NTE8 343 aa18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 LRRC8AQ8IWT6 810 aa18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 CLEC1AQ8NC01 280 aa18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 DLG3Q92796 817 aa18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 FER1L6-AS2Q96M78 137 aa18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 IP6K3Q96PC2 410 aa18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 MRM3Q9HC36 420 aaKnown RBP18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 CUTCQ9NTM9 273 aa18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 PCM1Q15154 2024 aa18.23■□□□□ 0.51
TM6SF1-201ENST00000258909 A0A1B0GX78 115 aa18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 CD63P08962 238 aa18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 ARSFP54793 590 aa18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 VSX2P58304 361 aaPredicted RBP18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 CCZ1BP86790 482 aa18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 CCZ1P86791 482 aaPredicted RBP18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 FASTKQ14296 549 aaKnown RBP18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 KCNJ11Q14654 390 aa18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 ZC3H12BQ5HYM0 836 aaKnown RBP18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 TTC27Q6P3X3 843 aa18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 CASC4Q6P4E1 433 aa18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 SHISA6Q6ZSJ9 500 aa18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 GALNT16Q8N428 558 aa18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 GALNT11Q8NCW6 608 aa18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 FOPNLQ96NB1 174 aa18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 SELENOSQ9BQE4 189 aa18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 RAB11FIP5Q9BXF6 653 aa18.22■□□□□ 0.51
TM6SF1-201ENST00000258909 BLACEA4D250 179 aa18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 ALOX12BO75342 701 aa18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 CHRM3P20309 590 aa18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 OR1D4P47884 311 aa18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 CDK16Q00536 496 aa18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 GRM7Q14831 915 aa18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 CYP2A13Q16696 494 aa18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 TYSND1Q2T9J0 566 aa18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 FRMPD2BQ6IN97 320 aa18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 COX15Q7KZN9 410 aa18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 OVCH1Q7RTY7 1134 aa18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 RAB42Q8N4Z0 105 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms