RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 MTRRQ9UBK8 725 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 MBD1Q9UIS9 605 aaPredicted RBP13.17□□□□□ -0.3
VHL-201ENST00000256474 TESMINQ9Y4I5 508 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 VIPP01282 170 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 CR2P20023 1033 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 CTSOP43234 321 aaPredicted RBP13.17□□□□□ -0.3
VHL-201ENST00000256474 TMED10P49755 219 aaKnown RBP13.17□□□□□ -0.3
VHL-201ENST00000256474 MOGQ16653 247 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 CARD16Q5EG05 197 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 COQ5Q5HYK3 327 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 NCEH1Q6PIU2 408 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 Q6ZNX1 250 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 ZNF366Q8N895 744 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 ZNF420Q8TAQ5 688 aaPredicted RBP13.17□□□□□ -0.3
VHL-201ENST00000256474 HPS1Q92902 700 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 SCAMP4Q969E2 229 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 OSBPL10Q9BXB5 764 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 HEBP1Q9NRV9 189 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 SCN3BQ9NY72 215 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 GNG14A0A1W2PPG7 69 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 H3BNC9 293 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 LCKP06239 509 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 ENGP17813 658 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 OR1E2P47887 323 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 IRF8Q02556 426 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 VEPH1Q14D04 833 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 TTLL9Q3SXZ7 439 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 C11orf74Q86VG3 221 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 P3H2Q8IVL5 708 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 PIK3C3Q8NEB9 887 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 DACH2Q96NX9 599 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 KCNC2Q96PR1 638 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 REXO4Q9GZR2 422 aaKnown RBP13.16□□□□□ -0.3
VHL-201ENST00000256474 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.16□□□□□ -0.39e-8■■■■■ 35.1
VHL-201ENST00000256474 H0YAE9 185 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 SLC28A1O00337 649 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 FPGTO14772 594 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 MT-ND2P03891 347 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 NUDT7P0C024 238 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 JAK1P23458 1154 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 HMGCLP35914 325 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 CAP1Q01518 475 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 EMX1Q04741 257 aaPredicted RBP13.16□□□□□ -0.3
VHL-201ENST00000256474 CHIT1Q13231 466 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 ADNP2Q6IQ32 1131 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 DCP2Q8IU60 420 aaKnown RBP13.16□□□□□ -0.3
VHL-201ENST00000256474 RHBDF1Q96CC6 855 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 SH3GL1Q99961 368 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 ASPSCR1Q9BZE9 553 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 AASDHPPTQ9NRN7 309 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 NPIPB15A6NHN6 443 aaPredicted RBP13.16□□□□□ -0.3
VHL-201ENST00000256474 CD160O95971 181 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 IGLV3-27P01718 113 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 HTR1AP08908 422 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 RELAQ04206 551 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 ATP13A5Q4VNC0 1218 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 CYP4Z1Q86W10 505 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 TTC29Q8NA56 475 aaPredicted RBP13.16□□□□□ -0.3
VHL-201ENST00000256474 GPR26Q8NDV2 337 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 TSPEARQ8WU66 669 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 PEX13Q92968 403 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 COPS8Q99627 209 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 KRT84Q9NSB2 600 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 FBXO10Q9UK96 956 aa13.16□□□□□ -0.3
VHL-201ENST00000256474 ZNF99A8MXY4 864 aaPredicted RBP13.15□□□□□ -0.3
VHL-201ENST00000256474 CBFA2T3O75081 653 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 LRRC66Q68CR7 880 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 SZRD1Q7Z422 152 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 VRK3Q8IV63 474 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 RAET1EQ8TD07 263 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 RMND5AQ9H871 391 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 TMEM161AQ9NX61 479 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 LHX3Q9UBR4 397 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 IL6P05231 212 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 KIR3DL1P43629 444 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 FKBP1BP68106 108 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 LRRC74AQ0VAA2 488 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 SLC13A2Q13183 592 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 CDK5R2Q13319 367 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 DPY19L1Q2PZI1 675 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 XKR6Q5GH73 641 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 RETSATQ6NUM9 610 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 CMTM8Q8IZV2 173 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 KLHL23Q8NBE8 558 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 LEMD2Q8NC56 503 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 OR5K1Q8NHB7 308 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 LZICQ8WZA0 190 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 SH3KBP1Q96B97 665 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 PYURFQ96I23 114 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 PCDHB1Q9Y5F3 818 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 MYO16Q9Y6X6 1858 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 FAM92AA1XBS5 289 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 CLDN25C9JDP6 229 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 H7C4K7 107 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 CLIC1O00299 241 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 ANKRD28O15084 1053 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 ZSCAN9O15535 394 aaPredicted RBP13.15□□□□□ -0.3
VHL-201ENST00000256474 PGLSO95336 258 aa13.15□□□□□ -0.3
VHL-201ENST00000256474 TUFMP49411 452 aaKnown RBP13.15□□□□□ -0.3
VHL-201ENST00000256474 BCAP31P51572 246 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms