RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 PEX13Q92968 403 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 RNF31Q96EP0 1072 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 P2RX2Q9UBL9 471 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 TTC24A2A3L6 582 aaPredicted RBP18.53■□□□□ 0.56
PTPRE-201ENST00000254667 SCAMP1O15126 338 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 PRAMEF12O95522 483 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 KLHL22Q53GT1 634 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 C7orf43Q8WVR3 580 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 TSEN15Q8WW01 171 aaKnown RBP18.53■□□□□ 0.56
PTPRE-201ENST00000254667 FCGR1BQ92637 280 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 GTPBP3Q969Y2 492 aaKnown RBP18.53■□□□□ 0.56
PTPRE-201ENST00000254667 EFHD2Q96C19 240 aaPredicted RBP18.53■□□□□ 0.56
PTPRE-201ENST00000254667 CYP2S1Q96SQ9 504 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 GPER1Q99527 375 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 DCLK1O15075 740 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 EBLN1P0CF75 366 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 KHDC1Q4VXA5 237 aaKnown RBP18.53■□□□□ 0.56
PTPRE-201ENST00000254667 PDE12Q6L8Q7 609 aaKnown RBP18.53■□□□□ 0.56
PTPRE-201ENST00000254667 TNFAIP8L2Q6P589 184 aaPredicted RBP18.53■□□□□ 0.56
PTPRE-201ENST00000254667 TOP1MTQ969P6 601 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 ASB9Q96DX5 294 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 CDK15Q96Q40 435 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 SLC2A13Q96QE2 648 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 MKKSQ9NPJ1 570 aaPredicted RBP18.53■□□□□ 0.56
PTPRE-201ENST00000254667 MCUBQ9NWR8 336 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 TP73O15350 636 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 IDH3BO43837 385 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 CBFA2T3O75081 653 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 NRLP54845 237 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 NRG3P56975 720 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 RELL1Q8IUW5 271 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 TFGQ92734 400 aaPredicted RBP18.53■□□□□ 0.56
PTPRE-201ENST00000254667 PEX2P28328 305 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 DSTNP60981 165 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 ADGRG6Q86SQ4 1221 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 KCNJ9Q92806 393 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 ADAP2Q9NPF8 381 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.53■□□□□ 0.56
PTPRE-201ENST00000254667 LYNP07948 512 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 YAP1P46937 504 aaKnown RBP18.53■□□□□ 0.56
PTPRE-201ENST00000254667 NRIP1P48552 1158 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 SLC30A6Q6NXT4 461 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 C2CD4AQ8NCU7 369 aaPredicted RBP18.53■□□□□ 0.56
PTPRE-201ENST00000254667 POF1BQ8WVV4 589 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 LRRC58Q96CX6 371 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 RAD9AQ99638 391 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 SLC22A14Q9Y267 594 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 CFL2Q9Y281 166 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 DHRS7Q9Y394 339 aa18.53■□□□□ 0.56
PTPRE-201ENST00000254667 NRXN3Q9Y4C0 1643 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 TGFB1P01137 390 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 HMGCS1Q01581 520 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 PARP8Q8N3A8 854 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 TRPV1Q8NER1 839 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 PIWIL1Q96J94 861 aaKnown RBP18.52■□□□□ 0.56
PTPRE-201ENST00000254667 TRNT1Q96Q11 434 aaKnown RBP18.52■□□□□ 0.56
PTPRE-201ENST00000254667 PEBP4Q96S96 227 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 C1QTNF1Q9BXJ1 281 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 ADAMTS10Q9H324 1103 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 FARSBQ9NSD9 589 aaKnown RBP18.52■□□□□ 0.56
PTPRE-201ENST00000254667 MAFFQ9ULX9 164 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 GABRQQ9UN88 632 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 MTX2O75431 263 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 CNTN5O94779 1100 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 DHFRP00374 187 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 HOXB2P14652 356 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 SYN1P17600 705 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 PGDP52209 483 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 LMO3Q8TAP4 145 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 CGREF1Q99674 301 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 DPYSL5Q9BPU6 564 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 SLC35A5Q9BS91 424 aa18.52■□□□□ 0.56
PTPRE-201ENST00000254667 SAGE2PA6NJ88 616 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 SLC10A3P09131 477 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 DLDP09622 509 aaKnown RBP18.52■□□□□ 0.55
PTPRE-201ENST00000254667 KCNA5P22460 613 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 FRRS1Q6ZNA5 592 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 P2RY8Q86VZ1 359 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 ZNF527Q8NB42 609 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 TMEM145Q8NBT3 493 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 LRIG1Q96JA1 1093 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 TIMMDC1Q9NPL8 285 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 MKL2Q9ULH7 1088 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 TAF4O00268 1085 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 CLIC1O00299 241 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 ERI3O43414 337 aaKnown RBP18.52■□□□□ 0.55
PTPRE-201ENST00000254667 MMP20O60882 483 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 LY6G5CQ5SRR4 150 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 BTN2A1Q7KYR7 527 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 C1orf52Q8N6N3 182 aaKnown RBP18.52■□□□□ 0.55
PTPRE-201ENST00000254667 ZNF483Q8TF39 744 aaPredicted RBP18.52■□□□□ 0.55
PTPRE-201ENST00000254667 IPCEF1Q8WWN9 437 aaPredicted RBP18.52■□□□□ 0.55
PTPRE-201ENST00000254667 CD320Q9NPF0 282 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 SLC2A4RGQ9NR83 387 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 PCDHGB7Q9Y5F8 929 aa18.52■□□□□ 0.55
PTPRE-201ENST00000254667 MANBAO00462 879 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 ITM2AO43736 263 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 C9P02748 559 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 HNRNPA1P09651 372 aaKnown RBP eCLIP18.51■□□□□ 0.55
PTPRE-201ENST00000254667 MYCLP1P12525 358 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms