RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 MIPEPQ99797 713 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 EIF2B3Q9NR50 452 aaKnown RBP18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 FZD4Q9ULV1 537 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 A8MT66 165 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 ENGP17813 658 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 PRAMEF14Q5SWL7 426 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 PRAMEF13Q5VWM6 474 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 TMEM209Q96SK2 561 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 ANKHQ9HCJ1 492 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 CORO1CQ9ULV4 474 aaPredicted RBP18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 PDE10AQ9Y233 779 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 EI24O14681 340 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 CH25HO95992 272 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 AHSGP02765 367 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 CKMT2P17540 419 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 WDR4P57081 412 aaKnown RBP18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 ID2Q02363 134 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 GALNT7Q86SF2 657 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 P2RY8Q86VZ1 359 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 ZZZ3Q8IYH5 903 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 COMMD3Q9UBI1 195 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 RAB26Q9ULW5 256 aa18.28■□□□□ 0.52
SMARCC1-201ENST00000254480 A0A0D9SEW6 157 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 B4GALT2O60909 372 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 RPS6KA3P51812 740 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 DCAKDQ8WVC6 231 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 TMEM203Q969S6 136 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 CITED4Q96RK1 184 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 MYOCOSA0A1B0GUC4 107 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 BCHEP06276 602 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 GPIP06744 558 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 TYRP14679 529 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 MEF2AQ02078 507 aaPredicted RBP18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 SGCBQ16585 318 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 AMIGO3Q86WK7 504 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 WDR12Q9GZL7 423 aaKnown RBP18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 TFB2MQ9H5Q4 396 aaKnown RBP18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 ZDHHC4Q9NPG8 344 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 ODF4Q2M2E3 257 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 ZNF648Q5T619 568 aaPredicted RBP18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 ZCCHC12Q6PEW1 402 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 ROPN1LQ96C74 230 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 VPS29Q9UBQ0 182 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 COQ4Q9Y3A0 265 aa18.27■□□□□ 0.52
SMARCC1-201ENST00000254480 A0A0U1RQF3 1178 aa18.27■□□□□ 0.51
SMARCC1-201ENST00000254480 PREPP48147 710 aa18.27■□□□□ 0.51
SMARCC1-201ENST00000254480 RAB25P57735 213 aa18.27■□□□□ 0.51
SMARCC1-201ENST00000254480 PPP3R1P63098 170 aa18.27■□□□□ 0.51
SMARCC1-201ENST00000254480 SLC35F4A4IF30 521 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 GLOD5A6NK44 160 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 LOC730098B7Z3J9 87 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 TMEM150CB9EJG8 249 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 POP7O75817 140 aaKnown RBP18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 CLPXO76031 633 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 UBXN7O94888 489 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 ALPPL2P10696 532 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 IMPDH1P20839 514 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 MPIP34949 423 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 FAUP35544 74 aaKnown RBP18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 EIF1AXP47813 144 aaKnown RBP18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 CLCN4P51793 760 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 CCNHP51946 323 aaPredicted RBP18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 TPGS2Q68CL5 300 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 NUP54Q7Z3B4 507 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 JPH3Q8WXH2 748 aaPredicted RBP18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 DHRS1Q96LJ7 313 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 CHIAQ9BZP6 476 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 PAPSS2O95340 614 aaPredicted RBP18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 ATP1B2P14415 290 aaPredicted RBP18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 XIAPP98170 497 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 SPATC1Q76KD6 591 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 OR9I1Q8NGQ6 314 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 RBCK1Q9BYM8 510 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 TOR3AQ9H497 397 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 ZNF282Q9UDV7 671 aaPredicted RBP18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 ANXA2P2A6NMY6 339 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 CCNKO75909 580 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 DHFRP00374 187 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 ANXA2P07355 339 aaKnown RBP18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 TDRPQ86YL5 185 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 TRPV5Q9NQA5 729 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 CENPMQ9NSP4 180 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 CPNE3O75131 537 aaKnown RBP18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 RPP14O95059 124 aaKnown RBP18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 CBLP22681 906 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 TSPAN5P62079 268 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 CCSAPQ6IQ19 270 aaPredicted RBP18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 PHC3Q8NDX5 983 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 OR2AP1Q8NGE2 309 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 SMOQ99835 787 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 PCBD2Q9H0N5 130 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 RNF121Q9H920 327 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 OXSMQ9NWU1 459 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 INSL6Q9Y581 213 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 ELOA3DA6NLF2 546 aaPredicted RBP18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 ACVR2AP27037 513 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 ELOA3BQ3SY89 546 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 LINGO2Q7L985 606 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 TRPV1Q8NER1 839 aa18.26■□□□□ 0.51
SMARCC1-201ENST00000254480 ELOA3Q8NG57 546 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms