RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.99■□□□□ 0.47
LRP3-201ENST00000253193 A0A1W2PQ45 241 aaPredicted RBP17.99■□□□□ 0.47
LRP3-201ENST00000253193 A0A1W2PQY0 241 aa17.99■□□□□ 0.47
LRP3-201ENST00000253193 INHBBP09529 407 aa17.99■□□□□ 0.47
LRP3-201ENST00000253193 ACRV1P26436 265 aa17.99■□□□□ 0.47
LRP3-201ENST00000253193 NSG1P42857 185 aa17.99■□□□□ 0.47
LRP3-201ENST00000253193 LRRC66Q68CR7 880 aa17.99■□□□□ 0.47
LRP3-201ENST00000253193 NXPE1Q8N323 547 aa17.99■□□□□ 0.47
LRP3-201ENST00000253193 SETD9Q8NE22 299 aa17.99■□□□□ 0.47
LRP3-201ENST00000253193 PYURFQ96I23 114 aa17.99■□□□□ 0.47
LRP3-201ENST00000253193 DPH2Q9BQC3 489 aaPredicted RBP17.99■□□□□ 0.47
LRP3-201ENST00000253193 SLC32A1Q9H598 525 aa17.99■□□□□ 0.47
LRP3-201ENST00000253193 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.99■□□□□ 0.47
LRP3-201ENST00000253193 AXIN1O15169 862 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 ERN1O75460 977 aaKnown RBP17.98■□□□□ 0.47
LRP3-201ENST00000253193 SERPINB7O75635 380 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 CLPXO76031 633 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 PFKLP17858 780 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 ZFP36L2P47974 494 aaKnown RBP17.98■□□□□ 0.47
LRP3-201ENST00000253193 SF1Q15637 639 aaKnown RBP17.98■□□□□ 0.47
LRP3-201ENST00000253193 PAPD5Q8NDF8 572 aaKnown RBP17.98■□□□□ 0.47
LRP3-201ENST00000253193 ZNF461Q8TAF7 563 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 HDAC2Q92769 488 aaKnown RBP17.98■□□□□ 0.47
LRP3-201ENST00000253193 ST14Q9Y5Y6 855 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 COQ9O75208 318 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 VNN2O95498 520 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 ZDHHC11BP0C7U3 371 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 CYP2A7P20853 494 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 SERPINB10P48595 397 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 TMBIM6P55061 237 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 TOP3AQ13472 1001 aaPredicted RBP17.98■□□□□ 0.47
LRP3-201ENST00000253193 INO80DQ53TQ3 878 aaPredicted RBP17.98■□□□□ 0.47
LRP3-201ENST00000253193 ALG1LQ6GMV1 187 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 CHDHQ8NE62 594 aaPredicted RBP17.98■□□□□ 0.47
LRP3-201ENST00000253193 APOL4Q9BPW4 351 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 P2RY12Q9H244 342 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 KRT84Q9NSB2 600 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 SLC25A37Q9NYZ2 338 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 GPRC5BQ9NZH0 403 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 TMEM9Q9P0T7 183 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 TMEM221A6NGB7 291 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 ZNF701M0R085 212 aaPredicted RBP17.98■□□□□ 0.47
LRP3-201ENST00000253193 BCAP31P51572 246 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 RAPSNQ13702 412 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 RFLNAQ6ZTI6 216 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 VTCN1Q7Z7D3 282 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 RIMKLAQ8IXN7 391 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 BCL7CQ8WUZ0 217 aaPredicted RBP17.98■□□□□ 0.47
LRP3-201ENST00000253193 ACPTQ9BZG2 426 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 AMBRA1Q9C0C7 1298 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 ROGDIQ9GZN7 287 aa17.98■□□□□ 0.47
LRP3-201ENST00000253193 MGAT4DA6NG13 374 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 CLIC1O00299 241 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 URODP06132 367 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 HOXD10P28358 340 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 IDH2P48735 452 aaKnown RBP17.97■□□□□ 0.47
LRP3-201ENST00000253193 ST13P50502 369 aaKnown RBP17.97■□□□□ 0.47
LRP3-201ENST00000253193 NPTX1Q15818 432 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 FAM26DQ5JW98 314 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 PDE12Q6L8Q7 609 aaKnown RBP17.97■□□□□ 0.47
LRP3-201ENST00000253193 AHSA2Q719I0 299 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 CYP2U1Q7Z449 544 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 TMCO2Q7Z6W1 182 aaPredicted RBP17.97■□□□□ 0.47
LRP3-201ENST00000253193 ADAMTS16Q8TE57 1224 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 UTP15Q8TED0 518 aaKnown RBP17.97■□□□□ 0.47
LRP3-201ENST00000253193 OSBPL10Q9BXB5 764 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 SMG9Q9H0W8 520 aaKnown RBP17.97■□□□□ 0.47
LRP3-201ENST00000253193 HMG20AQ9NP66 347 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 SLC6A13Q9NSD5 602 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 SAMD4AQ9UPU9 718 aaKnown RBP17.97■□□□□ 0.47
LRP3-201ENST00000253193 H0Y858 1186 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 ENGP17813 658 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 CA5AP35218 305 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 SNRPD1P62314 119 aaKnown RBP17.97■□□□□ 0.47
LRP3-201ENST00000253193 ATP13A5Q4VNC0 1218 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 PDPRQ8NCN5 879 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 OR13F1Q8NGS4 319 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 PIH1D2Q8WWB5 315 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 NELL1Q92832 810 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 DACH2Q96NX9 599 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 NEURL2Q9BR09 285 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 ERVK-18Q9QC07 812 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 ZNF99A8MXY4 864 aaPredicted RBP17.97■□□□□ 0.47
LRP3-201ENST00000253193 SLC1A7O00341 560 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 VPS37AQ8NEZ2 397 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 OR52J3Q8NH60 311 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 APIPQ96GX9 242 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 TUBA1CQ9BQE3 449 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 HTATIP2Q9BUP3 242 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 REXO4Q9GZR2 422 aaKnown RBP17.97■□□□□ 0.47
LRP3-201ENST00000253193 GORASP2Q9H8Y8 452 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 SPASTQ9UBP0 616 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 ZNF236Q9UL36 1845 aa17.97■□□□□ 0.47
LRP3-201ENST00000253193 TMEM247A6NEH6 219 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 HSMCR30P0CW71 290 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 VBP1P61758 197 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 LYPLAL1Q5VWZ2 237 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 NCCRP1Q6ZVX7 275 aaPredicted RBP17.96■□□□□ 0.47
LRP3-201ENST00000253193 FAM9CQ8IZT9 166 aa17.96■□□□□ 0.47
LRP3-201ENST00000253193 TTC29Q8NA56 475 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms