RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 FASTKQ14296 549 aaKnown RBP22.1■■□□□ 1.13
LSM4-201ENST00000252816 SF1Q15637 639 aaKnown RBP22.1■■□□□ 1.13
LSM4-201ENST00000252816 CYP2A13Q16696 494 aa22.1■■□□□ 1.13
LSM4-201ENST00000252816 CRTC2Q53ET0 693 aaPredicted RBP22.1■■□□□ 1.13
LSM4-201ENST00000252816 ZNF843Q8N446 348 aa22.1■■□□□ 1.13
LSM4-201ENST00000252816 MAGEC3Q8TD91 643 aa22.1■■□□□ 1.13
LSM4-201ENST00000252816 LRRC39Q96DD0 335 aa22.1■■□□□ 1.13
LSM4-201ENST00000252816 CLIP3Q96DZ5 547 aa22.1■■□□□ 1.13
LSM4-201ENST00000252816 MED8Q96G25 268 aa22.1■■□□□ 1.13
LSM4-201ENST00000252816 ARHGAP9Q9BRR9 750 aa22.1■■□□□ 1.13
LSM4-201ENST00000252816 SPRTNQ9H040 489 aaPredicted RBP22.1■■□□□ 1.13
LSM4-201ENST00000252816 CHST8Q9H2A9 424 aa22.1■■□□□ 1.13
LSM4-201ENST00000252816 PCMTD2Q9NV79 361 aa22.1■■□□□ 1.13
LSM4-201ENST00000252816 SPATA7Q9P0W8 599 aa22.1■■□□□ 1.13
LSM4-201ENST00000252816 A0A1W2PPV9 198 aa22.09■■□□□ 1.13
LSM4-201ENST00000252816 MYO1CO00159 1063 aa22.09■■□□□ 1.13
LSM4-201ENST00000252816 RAD51CO43502 376 aa22.09■■□□□ 1.13
LSM4-201ENST00000252816 AHSGP02765 367 aa22.09■■□□□ 1.13
LSM4-201ENST00000252816 FURINP09958 794 aa22.09■■□□□ 1.13
LSM4-201ENST00000252816 FASTKD3Q14CZ7 662 aaKnown RBP22.09■■□□□ 1.13
LSM4-201ENST00000252816 RBM20Q5T481 1227 aaKnown RBP22.09■■□□□ 1.13
LSM4-201ENST00000252816 TEDDM1Q5T9Z0 273 aa22.09■■□□□ 1.13
LSM4-201ENST00000252816 FCRL6Q6DN72 434 aa22.09■■□□□ 1.13
LSM4-201ENST00000252816 BORAQ6PGQ7 559 aa22.09■■□□□ 1.13
LSM4-201ENST00000252816 CYHR1Q6ZMK1 362 aa22.09■■□□□ 1.13
LSM4-201ENST00000252816 ANKMY2Q8IV38 441 aa22.09■■□□□ 1.13
LSM4-201ENST00000252816 CPNE9Q8IYJ1 553 aa22.09■■□□□ 1.13
LSM4-201ENST00000252816 OR9A1PQ8NGU1 263 aa22.09■■□□□ 1.13
LSM4-201ENST00000252816 N4BP2L2Q92802 583 aaPredicted RBP22.09■■□□□ 1.13
LSM4-201ENST00000252816 CATSPER2Q96P56 530 aa22.09■■□□□ 1.13
LSM4-201ENST00000252816 ACTL8Q9H568 366 aa22.09■■□□□ 1.13
LSM4-201ENST00000252816 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.09■■□□□ 1.13
LSM4-201ENST00000252816 SEC16AO15027 2179 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 FASNP49327 2511 aaKnown RBP22.08■■□□□ 1.13
LSM4-201ENST00000252816 FAM187AA6NFU0 413 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 CREG1O75629 220 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 OR2B3O76000 313 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 CATP04040 527 aaKnown RBP22.08■■□□□ 1.13
LSM4-201ENST00000252816 KLK3P07288 261 aaPredicted RBP22.08■■□□□ 1.13
LSM4-201ENST00000252816 MPC1LP0DKB6 136 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 ERGP11308 486 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 RPS18P62269 152 aaKnown RBP22.08■■□□□ 1.13
LSM4-201ENST00000252816 COL9A2Q14055 689 aaPredicted RBP22.08■■□□□ 1.13
LSM4-201ENST00000252816 ERV3-1Q14264 604 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 FIGLAQ6QHK4 219 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 KIAA0408Q6ZU52 694 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 PIWIL4Q7Z3Z4 852 aaKnown RBP22.08■■□□□ 1.13
LSM4-201ENST00000252816 GPR135Q8IZ08 494 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 RAB42Q8N4Z0 105 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 ASB11Q8WXH4 323 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 PKP4Q99569 1192 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 ERP44Q9BS26 406 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 GPR87Q9BY21 358 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 PPANQ9NQ55 473 aaKnown RBP22.08■■□□□ 1.13
LSM4-201ENST00000252816 FAM114A2Q9NRY5 505 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 PLCL2Q9UPR0 1127 aa22.08■■□□□ 1.13
LSM4-201ENST00000252816 COL6A6A6NMZ7 2263 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 E7ESA3 106 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 GFYI3L273 518 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 VPS26AO75436 327 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 ENO3P13929 434 aaPredicted RBP22.07■■□□□ 1.12
LSM4-201ENST00000252816 MCM3P25205 808 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 PTPN4P29074 926 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 GRIA3P42263 894 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 CDKN2DP55273 166 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 PDIA2Q13087 525 aaKnown RBP22.07■■□□□ 1.12
LSM4-201ENST00000252816 DEFB109BQ30KR1 87 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 PTCHD3Q3KNS1 767 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 ZNF385CQ66K41 422 aaPredicted RBP22.07■■□□□ 1.12
LSM4-201ENST00000252816 GALNT7Q86SF2 657 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 MCATQ8IVS2 390 aaKnown RBP22.07■■□□□ 1.12
LSM4-201ENST00000252816 SYTL1Q8IYJ3 562 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 FBXO36Q8NEA4 188 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 OR2A1Q8NGT9 310 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 GABPB2Q8TAK5 448 aaPredicted RBP22.07■■□□□ 1.12
LSM4-201ENST00000252816 MIPEPQ99797 713 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 DPH5Q9H2P9 285 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 EURLQ9NYK6 297 aa22.07■■□□□ 1.12
LSM4-201ENST00000252816 TLN1Q9Y490 2541 aaKnown RBP22.06■■□□□ 1.12
LSM4-201ENST00000252816 FKBP9O95302 570 aa22.06■■□□□ 1.12
LSM4-201ENST00000252816 CAPN1P07384 714 aa22.06■■□□□ 1.12
LSM4-201ENST00000252816 CBSLP0DN79 551 aa22.06■■□□□ 1.12
LSM4-201ENST00000252816 CBSP35520 551 aa22.06■■□□□ 1.12
LSM4-201ENST00000252816 YBX1P67809 324 aaKnown RBP22.06■■□□□ 1.12
LSM4-201ENST00000252816 C19orf57Q0VDD7 668 aa22.06■■□□□ 1.12
LSM4-201ENST00000252816 CBLBQ13191 982 aa22.06■■□□□ 1.12
LSM4-201ENST00000252816 FRG1Q14331 258 aaKnown RBP22.06■■□□□ 1.12
LSM4-201ENST00000252816 FAM198BQ6UWH4 519 aa22.06■■□□□ 1.12
LSM4-201ENST00000252816 MAATS1Q7Z4T9 603 aa22.06■■□□□ 1.12
LSM4-201ENST00000252816 ZNF655Q8N720 491 aaPredicted RBP22.06■■□□□ 1.12
LSM4-201ENST00000252816 FBXO15Q8NCQ5 510 aaPredicted RBP22.06■■□□□ 1.12
LSM4-201ENST00000252816 OR2L3Q8NG85 312 aa22.06■■□□□ 1.12
LSM4-201ENST00000252816 SLC7A5P2Q9GIP4 190 aa22.06■■□□□ 1.12
LSM4-201ENST00000252816 INTS7Q9NVH2 962 aaKnown RBP22.06■■□□□ 1.12
LSM4-201ENST00000252816 TRMT6Q9UJA5 497 aaKnown RBP22.06■■□□□ 1.12
LSM4-201ENST00000252816 FARSAQ9Y285 508 aaKnown RBP22.06■■□□□ 1.12
LSM4-201ENST00000252816 ZSCAN9O15535 394 aaPredicted RBP22.05■■□□□ 1.12
LSM4-201ENST00000252816 NRP2O60462 931 aa22.05■■□□□ 1.12
LSM4-201ENST00000252816 SLC16A8O95907 504 aa22.05■■□□□ 1.12
LSM4-201ENST00000252816 CCR10P46092 362 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms