RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 NUSAP1Q9BXS6 441 aaKnown RBP11.68□□□□□ -0.54
USHBP1-201ENST00000252597 CEP44Q9C0F1 390 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 AASDHPPTQ9NRN7 309 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 RHCGQ9UBD6 479 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 PRSS21Q9Y6M0 314 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 NINQ8N4C6 2090 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 MYO10Q9HD67 2058 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 TNFRSF10BO14763 440 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 KPNA5O15131 536 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 CCNKO75909 580 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 CLDN7O95471 211 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 NUDT7P0C024 238 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 SLC26A3P40879 764 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 SLC11A2P49281 568 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 CREMQ03060 361 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 GRB14Q14449 540 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 NFE2Q16621 373 aaPredicted RBP11.68□□□□□ -0.54
USHBP1-201ENST00000252597 KIAA1841Q6NSI8 718 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 PLEKHG7Q6ZR37 379 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 ADAMTSL2Q86TH1 951 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 LRRC49Q8IUZ0 686 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 PYURFQ96I23 114 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 KAT8Q9H7Z6 458 aaKnown RBP11.68□□□□□ -0.54
USHBP1-201ENST00000252597 NLE1Q9NVX2 485 aaPredicted RBP11.68□□□□□ -0.54
USHBP1-201ENST00000252597 IL37Q9NZH6 218 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 VCANP13611 3396 aa11.68□□□□□ -0.54
USHBP1-201ENST00000252597 SAP18O00422 153 aaKnown RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 UGT2B11O75310 529 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 IGLV3-25P01717 112 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 ZNF7P17097 686 aaPredicted RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 GADD45AP24522 165 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 MZF1P28698 734 aaPredicted RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 PBLDP30039 288 aaPredicted RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 CRATP43155 626 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 ZFP36L2P47974 494 aaKnown RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 ILF2Q12905 390 aaKnown RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 GANABQ14697 944 aaKnown RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 FAM110CQ1W6H9 321 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 USP39Q53GS9 565 aaKnown RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 ZNF362Q5T0B9 420 aaPredicted RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 PDPRQ8NCN5 879 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 SETD9Q8NE22 299 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 SPATA17Q96L03 361 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 ZNF382Q96SR6 550 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 SH3GL1Q99961 368 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 CRISPLD1Q9H336 500 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 DSN1Q9H410 356 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 TRIM39Q9HCM9 518 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 SLC52A3Q9NQ40 469 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 ELOVL2Q9NXB9 296 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 PCDHGA10Q9Y5H3 936 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 GNG14A0A1W2PPG7 69 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 HIST1H2AGP0C0S8 130 aaPredicted RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 ENGP17813 658 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 HIST1H2ADP20671 130 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 RPP38P78345 283 aaKnown RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 SMARCB1Q12824 385 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 MAP2K5Q13163 448 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 CDH18Q13634 790 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 OXA1LQ15070 435 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 TAF1AQ15573 450 aaPredicted RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 SLC14A2Q15849 920 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 OR2T5Q6IEZ7 315 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 ANKS3Q6ZW76 656 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 LSRQ86X29 649 aaPredicted RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 OR2T29Q8NH02 315 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 ADAMTS16Q8TE57 1224 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 MUL1Q969V5 352 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 HIST1H2AHQ96KK5 128 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 HIST1H2AJQ99878 128 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 H2AFJQ9BTM1 129 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 YTHDF1Q9BYJ9 559 aaKnown RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 NUAK2Q9H093 628 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 OR51E2Q9H255 320 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 MUC13Q9H3R2 512 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 GPN2Q9H9Y4 310 aaPredicted RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 FAM32AQ9Y421 112 aaKnown RBP11.67□□□□□ -0.54
USHBP1-201ENST00000252597 SCN4AP35499 1836 aa11.67□□□□□ -0.54
USHBP1-201ENST00000252597 RBM47A0AV96 593 aaKnown RBP11.66□□□□□ -0.54
USHBP1-201ENST00000252597 PDZK1P1A8MUH7 402 aa11.66□□□□□ -0.54
USHBP1-201ENST00000252597 FPGTO14772 594 aa11.66□□□□□ -0.54
USHBP1-201ENST00000252597 JRKO75564 520 aa11.66□□□□□ -0.54
USHBP1-201ENST00000252597 KRT6AP02538 564 aa11.66□□□□□ -0.54
USHBP1-201ENST00000252597 APOA1P02647 267 aa11.66□□□□□ -0.54
USHBP1-201ENST00000252597 KRT6BP04259 564 aa11.66□□□□□ -0.54
USHBP1-201ENST00000252597 CORO1AP31146 461 aaKnown RBP11.66□□□□□ -0.54
USHBP1-201ENST00000252597 KRT6CP48668 564 aa11.66□□□□□ -0.54
USHBP1-201ENST00000252597 VLDLRP98155 873 aa11.66□□□□□ -0.54
USHBP1-201ENST00000252597 PPP2R2BQ00005 443 aa11.66□□□□□ -0.54
USHBP1-201ENST00000252597 RUNDC3AQ59EK9 446 aa11.66□□□□□ -0.54
USHBP1-201ENST00000252597 XKR7Q5GH72 579 aa11.66□□□□□ -0.54
USHBP1-201ENST00000252597 SPOUT1Q5T280 376 aaKnown RBP11.66□□□□□ -0.54
USHBP1-201ENST00000252597 ATAD3BQ5T9A4 648 aa11.66□□□□□ -0.54
USHBP1-201ENST00000252597 ARMC8Q8IUR7 673 aa11.66□□□□□ -0.54
USHBP1-201ENST00000252597 COLGALT2Q8IYK4 626 aa11.66□□□□□ -0.54
USHBP1-201ENST00000252597 ZNF641Q96N77 438 aaPredicted RBP11.66□□□□□ -0.54
USHBP1-201ENST00000252597 GPR83Q9NYM4 423 aa11.66□□□□□ -0.54
USHBP1-201ENST00000252597 SLC22A14Q9Y267 594 aa11.66□□□□□ -0.54
USHBP1-201ENST00000252597 STK16O75716 305 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms