RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 RRP9O43818 475 aaKnown RBP12.54□□□□□ -0.4
LSM8-201ENST00000249299 CCNT2O60583 730 aaKnown RBP12.54□□□□□ -0.4
LSM8-201ENST00000249299 VIPP01282 170 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 GNAZP19086 355 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 HRH2P25021 359 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 PKLRP30613 574 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 SH3BP2P78314 561 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 NAE1Q13564 534 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 TBCCQ15814 346 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 ZXDCQ2QGD7 858 aaPredicted RBP12.54□□□□□ -0.4
LSM8-201ENST00000249299 ZNF542PQ5EBM4 170 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 GKAP1Q5VSY0 366 aaPredicted RBP12.54□□□□□ -0.4
LSM8-201ENST00000249299 LAIR1Q6GTX8 287 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 LCTLQ6UWM7 567 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 LAYNQ6UX15 382 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 FAM47EQ6ZV65 393 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 GPRIN3Q6ZVF9 776 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 GOLGA7Q7Z5G4 137 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 PIGWQ7Z7B1 504 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 CUZD1Q86UP6 607 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 THOC6Q86W42 341 aaKnown RBP12.54□□□□□ -0.4
LSM8-201ENST00000249299 TRIM48Q8IWZ4 208 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 NAGSQ8N159 534 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 TEX9Q8N6V9 391 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 L3MBTL4Q8NA19 623 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 MAPK15Q8TD08 544 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 LMX1AQ8TE12 382 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 AGAP11Q8TF27 550 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 RNF166Q96A37 237 aaPredicted RBP12.54□□□□□ -0.4
LSM8-201ENST00000249299 COL25A1Q9BXS0 654 aaPredicted RBP12.54□□□□□ -0.4
LSM8-201ENST00000249299 NUSAP1Q9BXS6 441 aaKnown RBP12.54□□□□□ -0.4
LSM8-201ENST00000249299 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.54□□□□□ -0.4
LSM8-201ENST00000249299 PITHD1Q9GZP4 211 aaPredicted RBP12.54□□□□□ -0.4
LSM8-201ENST00000249299 IPPKQ9H8X2 491 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 ZBTB26Q9HCK0 441 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 TRPS1Q9UHF7 1281 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 TRAF6Q9Y4K3 522 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 ENTPD2Q9Y5L3 495 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 SNX11Q9Y5W9 270 aa12.54□□□□□ -0.4
LSM8-201ENST00000249299 MATN2O00339 956 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 HDAC3O15379 428 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 SNX3O60493 162 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 WDR47O94967 919 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 CER1O95813 267 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 EML2O95834 649 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 CHRNGP07510 517 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 ZNF883P0CG24 379 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 UROSP10746 265 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 ARRB2P32121 409 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 CCNG1P51959 295 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 ABATP80404 500 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 BNC1Q01954 994 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 GRIK2Q13002 908 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 NAA25Q14CX7 972 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 TERF2Q15554 542 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 CCSMST1Q4G0I0 132 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 LIPJQ5W064 366 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 MBOAT1Q6ZNC8 495 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 LAPTM4BQ86VI4 370 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 OR6C4Q8NGE1 309 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 OR52E1Q8NGJ3 308 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 BCAS4Q8TDM0 211 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 TRPC4APQ8TEL6 797 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 LCN9Q8WX39 176 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 WDR34Q96EX3 536 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 SLC29A3Q9BZD2 475 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 KCNH6Q9H252 994 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 EPB41L1Q9H4G0 881 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 NOL11Q9H8H0 719 aaKnown RBP12.53□□□□□ -0.4
LSM8-201ENST00000249299 INTS7Q9NVH2 962 aaKnown RBP12.53□□□□□ -0.4
LSM8-201ENST00000249299 KCNK4Q9NYG8 393 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 SLC22A14Q9Y267 594 aa12.53□□□□□ -0.4
LSM8-201ENST00000249299 TDRKHQ9Y2W6 561 aaKnown RBP12.53□□□□□ -0.4
LSM8-201ENST00000249299 GON4LQ3T8J9 2241 aa12.52□□□□□ -0.4
LSM8-201ENST00000249299 FAM86C2PA6NEL3 165 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 LILRA5A6NI73 299 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 TRPC5OSA6NMA1 111 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 NDUFAB1O14561 156 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 UBFD1O14562 309 aaKnown RBP12.52□□□□□ -0.41
LSM8-201ENST00000249299 CLGNO14967 610 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 AZIN1O14977 448 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 PCDHGA12O60330 932 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 CCNDBP1O95273 360 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 CLDN9O95484 217 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 CHEK2O96017 543 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 ALPPL2P10696 532 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 PCSK2P16519 638 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 NPPBP16860 134 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 EPHA8P29322 1005 aaPredicted RBP12.52□□□□□ -0.41
LSM8-201ENST00000249299 HNF4AP41235 474 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 GDF5P43026 501 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 CDH13P55290 713 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 TBPL1P62380 186 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 TRAF3Q13114 568 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 PRKG2Q13237 762 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 C1orf61Q13536 156 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 LAPTM5Q13571 262 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 KIR2DS3Q14952 304 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.52□□□□□ -0.41
LSM8-201ENST00000249299 KLHL35Q6PF15 583 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms