RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 STRA8Q7Z7C7 330 aa23.47■■□□□ 1.35
SDF2L1-201ENST00000248958 TRIM73Q86UV7 250 aa23.47■■□□□ 1.35
SDF2L1-201ENST00000248958 MYO1HQ8N1T3 1032 aa23.47■■□□□ 1.35
SDF2L1-201ENST00000248958 GALNT6Q8NCL4 622 aa23.47■■□□□ 1.35
SDF2L1-201ENST00000248958 DENND1AQ8TEH3 1009 aa23.47■■□□□ 1.35
SDF2L1-201ENST00000248958 KLHL25Q9H0H3 589 aa23.47■■□□□ 1.35
SDF2L1-201ENST00000248958 GPN2Q9H9Y4 310 aaPredicted RBP23.47■■□□□ 1.35
SDF2L1-201ENST00000248958 PADI1Q9ULC6 663 aa23.47■■□□□ 1.35
SDF2L1-201ENST00000248958 PCM1Q15154 2024 aa23.47■■□□□ 1.35
SDF2L1-201ENST00000248958 SLC16A5O15375 505 aa23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 SNRNP200O75643 2136 aaKnown RBP23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 TIAF1O95411 115 aa23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 C8GP07360 202 aa23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 FDXRP22570 491 aa23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 STAT5AP42229 794 aa23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 CDKN2DP55273 166 aa23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 ITGA1P56199 1179 aa23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 SP140Q13342 867 aa23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 C3orf62Q6ZUJ4 267 aa23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 TAX1BP1Q86VP1 789 aa23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 C2orf73Q8N5S3 287 aaPredicted RBP23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 CEP112Q8N8E3 955 aa23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 LMNTD1Q8N9Z9 388 aa23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 SMPDL3AQ92484 453 aa23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 ZUFSPQ96AP4 578 aa23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 LRFN5Q96NI6 719 aa23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 PKP4Q99569 1192 aa23.46■■□□□ 1.35
SDF2L1-201ENST00000248958 LOC101059948A0A1B0GTJ6 334 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 TARM1B6A8C7 271 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 E7EQ34 232 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 HBQ1P09105 142 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 LIFP15018 202 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 CYP2A7P20853 494 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 MAGEA4P43358 317 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 IL2P60568 153 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 GUCY2DQ02846 1103 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 SRSF6Q13247 344 aaKnown RBP23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 CAPN12Q6ZSI9 719 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 UBE2R2Q712K3 238 aaPredicted RBP23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 PIWIL4Q7Z3Z4 852 aaKnown RBP23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 ZC3HC1Q86WB0 502 aaKnown RBP23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 CCDC25Q86WR0 208 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 GPR135Q8IZ08 494 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 OR1L3Q8NH93 324 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 MCOLN3Q8TDD5 553 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 EEF1AKMT1Q8WVE0 214 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 FAM60AQ9NP50 221 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 LHX9Q9NQ69 397 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 TXNDC16Q9P2K2 825 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 PCDHGA4Q9Y5G9 962 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 LAMA5O15230 3695 aa23.45■■□□□ 1.34
SDF2L1-201ENST00000248958 NTRK1P04629 796 aa23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 MAGP20916 626 aa23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 PNLIPRP1P54315 467 aa23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 TRADDQ15628 312 aa23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 ZIC1Q15915 447 aa23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 ZC3H12BQ5HYM0 836 aaKnown RBP23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 DNAJC22Q8N4W6 341 aa23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 LINGO1Q96FE5 620 aa23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 SLC45A3Q96JT2 553 aa23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 UBL7Q96S82 380 aaPredicted RBP23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 SLC12A9Q9BXP2 914 aa23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 TSPYL1Q9H0U9 437 aa23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 RHOJQ9H4E5 214 aa23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 MTRF1LQ9UGC7 380 aaKnown RBP23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 PLCL2Q9UPR0 1127 aa23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 KLK4Q9Y5K2 254 aa23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 PSAT1Q9Y617 370 aa23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 AP1M2Q9Y6Q5 423 aa23.44■■□□□ 1.34
SDF2L1-201ENST00000248958 FAM95CA0A1B0GW59 222 aa23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 A0A1W2PPV9 198 aa23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 TCRBV9S1A1TA0A576 114 aa23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 ESYT3A0FGR9 886 aa23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 SYF2O95926 243 aaKnown RBP23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 KLK3P07288 261 aaPredicted RBP23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 CMPK1P30085 196 aa23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 GABRA4P48169 554 aa23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 FIGLAQ6QHK4 219 aa23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 OR2L3Q8NG85 312 aa23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 OR2A1Q8NGT9 310 aa23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 PDLIM5Q96HC4 596 aaKnown RBP23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 VPS39Q96JC1 886 aa23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 CPNE1Q99829 537 aa23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 FAM117AQ9C073 453 aa23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 SLC7A5P2Q9GIP4 190 aa23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 ZDHHC18Q9NUE0 388 aa23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 KCND3Q9UK17 655 aa23.43■■□□□ 1.34
SDF2L1-201ENST00000248958 CACNA1GO43497 2377 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 FAM159BA6NKW6 160 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 ZNF891A8MT65 544 aaPredicted RBP23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 C21orf140B9A014 251 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 CCNDBP1O95273 360 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 SLC16A8O95907 504 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 HIST1H2AGP0C0S8 130 aaPredicted RBP23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 HIST1H2ADP20671 130 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 STX2P32856 288 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 RPA3P35244 121 aaPredicted RBP23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 MC1RQ01726 317 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 FASTKQ14296 549 aaKnown RBP23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 TLDC1Q6P9B6 456 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms