RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 CEP19Q96LK0 163 aa16.45■□□□□ 0.22
SGPP1-201ENST00000247225 SH3BP4Q9P0V3 963 aa16.45■□□□□ 0.22
SGPP1-201ENST00000247225 TMEFF2Q9UIK5 374 aaPredicted RBP16.45■□□□□ 0.22
SGPP1-201ENST00000247225 A0A0U1RQF3 1178 aa16.45■□□□□ 0.22
SGPP1-201ENST00000247225 TTC36A6NLP5 189 aa16.45■□□□□ 0.22
SGPP1-201ENST00000247225 GADD45AP24522 165 aa16.45■□□□□ 0.22
SGPP1-201ENST00000247225 RPP38P78345 283 aaKnown RBP16.45■□□□□ 0.22
SGPP1-201ENST00000247225 TYSND1Q2T9J0 566 aa16.45■□□□□ 0.22
SGPP1-201ENST00000247225 PRSS36Q5K4E3 855 aa16.45■□□□□ 0.22
SGPP1-201ENST00000247225 NLGN4XQ8N0W4 816 aa16.45■□□□□ 0.22
SGPP1-201ENST00000247225 ASIC4Q96FT7 647 aa16.45■□□□□ 0.22
SGPP1-201ENST00000247225 COPS4Q9BT78 406 aa16.45■□□□□ 0.22
SGPP1-201ENST00000247225 MROQ9BYG7 248 aa16.45■□□□□ 0.22
SGPP1-201ENST00000247225 DSN1Q9H410 356 aa16.45■□□□□ 0.22
SGPP1-201ENST00000247225 REEP1Q9H902 201 aa16.45■□□□□ 0.22
SGPP1-201ENST00000247225 SCHIP1Q9P0W5 487 aaPredicted RBP16.45■□□□□ 0.22
SGPP1-201ENST00000247225 TAPBPO15533 448 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 CELF2O95319 508 aaKnown RBP16.44■□□□□ 0.22
SGPP1-201ENST00000247225 HOXB8P17481 243 aaPredicted RBP16.44■□□□□ 0.22
SGPP1-201ENST00000247225 ENGP17813 658 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 S100A5P33763 92 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 MRPS15P82914 257 aaKnown RBP16.44■□□□□ 0.22
SGPP1-201ENST00000247225 TAB1Q15750 504 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 OR2T5Q6IEZ7 315 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 TEX26Q8N6G2 289 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 GOLM1Q8NBJ4 401 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 GPR150Q8NGU9 434 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 OR2T29Q8NH02 315 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 ISG20Q96AZ6 181 aaKnown RBP16.44■□□□□ 0.22
SGPP1-201ENST00000247225 APOL4Q9BPW4 351 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 TSEN34Q9BSV6 310 aaKnown RBP16.44■□□□□ 0.22
SGPP1-201ENST00000247225 C8orf4Q9NR00 106 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 DCAF13Q9NV06 445 aaKnown RBP16.44■□□□□ 0.22
SGPP1-201ENST00000247225 WDR47O94967 919 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 SCELO95171 688 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 ZNF7P17097 686 aaPredicted RBP16.44■□□□□ 0.22
SGPP1-201ENST00000247225 JUNBP17275 347 aaPredicted RBP16.44■□□□□ 0.22
SGPP1-201ENST00000247225 CORO1AP31146 461 aaKnown RBP16.44■□□□□ 0.22
SGPP1-201ENST00000247225 KRT20P35900 424 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 SLC11A2P49281 568 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 EIF4EBP2Q13542 120 aaPredicted RBP16.44■□□□□ 0.22
SGPP1-201ENST00000247225 MED22Q15528 200 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 POM121L1PQ3SYA9 428 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 C1QTNF12Q5T7M4 302 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 SBSNQ6UWP8 590 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 RFLNAQ6ZTI6 216 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 AKAP14Q86UN6 197 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 HIPK1Q86Z02 1210 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 APIPQ96GX9 242 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 SH3GL1Q99961 368 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 OR51E2Q9H255 320 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 ERVK13-1Q9NX77 482 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 ZNF639Q9UID6 485 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 ASNA1O43681 348 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 SSX4O60224 188 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 LIPAP38571 399 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 SUOXP51687 545 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 CRISP3P54108 245 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 ILF2Q12905 390 aaKnown RBP16.44■□□□□ 0.22
SGPP1-201ENST00000247225 USP39Q53GS9 565 aaKnown RBP16.44■□□□□ 0.22
SGPP1-201ENST00000247225 UBE2UQ5VVX9 321 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 SYT12Q8IV01 421 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 STX19Q8N4C7 294 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 TSPEARQ8WU66 669 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 WBP2Q969T9 261 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 GTPBP3Q969Y2 492 aaKnown RBP16.44■□□□□ 0.22
SGPP1-201ENST00000247225 KAT8Q9H7Z6 458 aaKnown RBP16.44■□□□□ 0.22
SGPP1-201ENST00000247225 RHCGQ9UBD6 479 aa16.44■□□□□ 0.22
SGPP1-201ENST00000247225 TNPO3Q9Y5L0 923 aaKnown RBP16.44■□□□□ 0.22
SGPP1-201ENST00000247225 TRIM64A6NGJ6 449 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 MANBAO00462 879 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 STK16O75716 305 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 COX7A2P14406 83 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 ATP5C1P36542 298 aaKnown RBP16.43■□□□□ 0.22
SGPP1-201ENST00000247225 ALDH7A1P49419 539 aaKnown RBP16.43■□□□□ 0.22
SGPP1-201ENST00000247225 YBEYP58557 167 aaPredicted RBP16.43■□□□□ 0.22
SGPP1-201ENST00000247225 LRRC74AQ0VAA2 488 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 SELENBP1Q13228 472 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 TRIM60Q495X7 471 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 ANKS3Q6ZW76 656 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 LSRQ86X29 649 aaPredicted RBP16.43■□□□□ 0.22
SGPP1-201ENST00000247225 ARMC8Q8IUR7 673 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 KLHDC8BQ8IXV7 354 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 SVOPLQ8N434 492 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 DPP10Q8N608 796 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 ZNF641Q96N77 438 aaPredicted RBP16.43■□□□□ 0.22
SGPP1-201ENST00000247225 PKMYT1Q99640 499 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 TTPALQ9BTX7 342 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 BEX2Q9BXY8 128 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 GPR83Q9NYM4 423 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 SLC22A14Q9Y267 594 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 DNMT3AQ9Y6K1 912 aaPredicted RBP16.43■□□□□ 0.22
SGPP1-201ENST00000247225 HAS3O00219 553 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 CLIC1O00299 241 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 FPGTO14772 594 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 AREL1O15033 823 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 ACSL4O60488 711 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 STSP08842 583 aa16.43■□□□□ 0.22
SGPP1-201ENST00000247225 HOXD8P13378 290 aaPredicted RBP16.43■□□□□ 0.22
SGPP1-201ENST00000247225 CD40LGP29965 261 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms