RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 RIOK2Q9BVS4 552 aaKnown RBP16.9■□□□□ 0.3
LRFN3-201ENST00000246529 NPLQ9BXD5 320 aaPredicted RBP16.9■□□□□ 0.3
LRFN3-201ENST00000246529 DENND4CQ5VZ89 1909 aa16.9■□□□□ 0.3
LRFN3-201ENST00000246529 LTBP2Q14767 1821 aa16.9■□□□□ 0.3
LRFN3-201ENST00000246529 PABPN1LA6NDY0 278 aaKnown RBP16.9■□□□□ 0.3
LRFN3-201ENST00000246529 TRIM64CA6NLI5 447 aa16.9■□□□□ 0.3
LRFN3-201ENST00000246529 GFYI3L273 518 aa16.9■□□□□ 0.3
LRFN3-201ENST00000246529 CTSLP07711 333 aa16.9■□□□□ 0.3
LRFN3-201ENST00000246529 CD22P20273 847 aa16.9■□□□□ 0.3
LRFN3-201ENST00000246529 RECQLP46063 649 aaPredicted RBP16.9■□□□□ 0.3
LRFN3-201ENST00000246529 PFN3P60673 137 aa16.9■□□□□ 0.3
LRFN3-201ENST00000246529 PON2Q15165 354 aa16.9■□□□□ 0.3
LRFN3-201ENST00000246529 CCSMST1Q4G0I0 132 aa16.9■□□□□ 0.3
LRFN3-201ENST00000246529 ZNF551Q7Z340 670 aaPredicted RBP16.9■□□□□ 0.3
LRFN3-201ENST00000246529 EMILIN2Q9BXX0 1053 aa16.9■□□□□ 0.3
LRFN3-201ENST00000246529 UGT2B28Q9BY64 529 aa16.9■□□□□ 0.3
LRFN3-201ENST00000246529 SPHK2Q9NRA0 654 aa16.9■□□□□ 0.3
LRFN3-201ENST00000246529 TDP1Q9NUW8 608 aa16.9■□□□□ 0.3
LRFN3-201ENST00000246529 DNAJC11Q9NVH1 559 aa16.9■□□□□ 0.3
LRFN3-201ENST00000246529 THEGQ9P2T0 379 aa16.9■□□□□ 0.3
LRFN3-201ENST00000246529 C5orf42Q9H799 3197 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 A0A1W2PQ67 120 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 TRIM64A6NGJ6 449 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 G3V2T6 193 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 SH3BGRLO75368 114 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 SERPINA1P01009 418 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 CYP2A7P20853 494 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 PTPN6P29350 595 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 PREPP48147 710 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 PMS2P3Q13401 168 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 AP1ARQ63HQ0 302 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 OR4F3Q6IEY1 312 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 ZSWIM3Q96MP5 696 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 CDC14AQ9UNH5 594 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 ERVW-1Q9UQF0 538 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 CREG1O75629 220 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 TIMP1P01033 207 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 MPC1LP0DKB6 136 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 PRKACGP22612 351 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 VIPR1P32241 457 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 GZMMP51124 257 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 POLR2LP62875 67 aaKnown RBP16.89■□□□□ 0.29
LRFN3-201ENST00000246529 DDX39BQ13838 428 aaKnown RBP16.89■□□□□ 0.29
LRFN3-201ENST00000246529 GGTA1PQ4G0N0 100 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.89■□□□□ 0.29
LRFN3-201ENST00000246529 CDKL4Q5MAI5 379 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 PLEKHS1Q5SXH7 462 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 FRG2Q64ET8 278 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 ADNP2Q6IQ32 1131 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 TMEM179BQ7Z7N9 219 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 ZDHHC13Q8IUH4 622 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 TCAIMQ8N3R3 496 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 AADATQ8N5Z0 425 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 L3MBTL4Q8NA19 623 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 MCOLN3Q8TDD5 553 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 FAM120BQ96EK7 910 aaKnown RBP16.89■□□□□ 0.29
LRFN3-201ENST00000246529 FRG2BQ96QU4 278 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 KCNH6Q9H252 994 aa16.89■□□□□ 0.29
LRFN3-201ENST00000246529 TMX2-CTNND1H3BSU7 103 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 THRBP10828 461 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 TIMP2P16035 220 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 AMD1P17707 334 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 EFNA1P20827 205 aaPredicted RBP16.88■□□□□ 0.29
LRFN3-201ENST00000246529 HNMTP50135 292 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 CTSCP53634 463 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 CBX2Q14781 532 aaPredicted RBP16.88■□□□□ 0.29
LRFN3-201ENST00000246529 C11orf91Q3C1V1 193 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 GALNT13Q8IUC8 556 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 PLPP6Q8IY26 295 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 OR7A2PQ8NGA2 310 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 CDC26Q8NHZ8 85 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 FRS2Q8WU20 508 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 CMTM7Q96FZ5 175 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 MTERF1Q99551 399 aaKnown RBP16.88■□□□□ 0.29
LRFN3-201ENST00000246529 SH3GL1Q99961 368 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 HEPHQ9BQS7 1158 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 CRISPLD2Q9H0B8 497 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 TOR3AQ9H497 397 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 TUBA8Q9NY65 449 aaPredicted RBP16.88■□□□□ 0.29
LRFN3-201ENST00000246529 ITM2BQ9Y287 266 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 U3KQV3 271 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 A0A096LPI6 279 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 ARHGEF33A8MVX0 844 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 EIF3FO00303 357 aaPredicted RBP16.88■□□□□ 0.29
LRFN3-201ENST00000246529 GNGT2O14610 69 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 TSPAN6O43657 245 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 POLR2IP36954 125 aaKnown RBP16.88■□□□□ 0.29
LRFN3-201ENST00000246529 SH3BGRP55822 239 aaPredicted RBP16.88■□□□□ 0.29
LRFN3-201ENST00000246529 LRIF1Q5T3J3 769 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 C1orf53Q5VUE5 145 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 ZDHHC20Q5W0Z9 365 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 ANKRD26P1Q6NSI1 321 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 NOXRED1Q6NXP6 359 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 CALHM3Q86XJ0 350 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 ISOC1Q96CN7 298 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 ITCHQ96J02 903 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 MRGPRX3Q96LB0 322 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 POLR1BQ9H9Y6 1135 aa16.88■□□□□ 0.29
LRFN3-201ENST00000246529 DCAF13Q9NV06 445 aaKnown RBP16.88■□□□□ 0.29
LRFN3-201ENST00000246529 DNAJB9Q9UBS3 223 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms